Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02869 ATGGCTTCGACTCTCACAATTGTAAGAAATCCCATTTTCCTTACTCACCATTACCAATTCAACAAGCAGTTCACAACACCTTCTTCCTTACGCCTCCTCAGTTTCGCAAAGATGGAAGGAAGTGAGATTAGTGAGGAAGTGGGGGAGGATTCGAGAGCGAAGAGGAAAATTTTTGTTGCTGGAGCCACTGGTAGCACTGGGAAAAGAATCGTTGAGCAGTTATTGGCAAAGGGTTTTTCTGTTAAGGCTGGGGTTAGGGATTTGGACAAGGCCAAGTCCACCCTTTCCTCTGCCAACCCATCTCTTCAAATTATAAAAGCTGATGTCACAGAGGGGTCTGATAAGCTAGCTGAAGCCATTGGTGATGATTCAGAAGCAGTGGTATGTGCCACGGGCTTTCGGCCGGGCTGGGATTTGCTTGCTCCGTGGAAGGTTGACAATTTTGGTACTGTAAACCTTGTTGAAGCATGCAGGAAACGTAATGTCAAGAGATTCATTCTTATCAGTTCCATCTTAGTTAATGGAGCATCTATGGGACAGCTACTCAATCCGGCTTACATCTTTCTTAATGTTTTTGGACTCACCTTAGTAGCAAAACTACAGGCAGAGAATTATATCAGGAAATCTGGCATAAACTACACAATTATAAGACCGGGCGGGTTGAGAAATGATCCTCCAACTGGAAATGTTGTTATGGAGCCAGAGGACACCCTTTATGAAGGTTCCATATCCAGAGATCAAGTTGCGGAAGTAGCTGTGGAGGCATTGGCTTATCCTGAGGCATCTTACAAAGTCGTGGAAATTGTGTCTCGCCCAGATGCTGCTAAGCGTTCATACCATGACCTTTTTGGTTCCATAAGGCAGCGATGA 870 0.4494 MASTLTIVRNPIFLTHHYQFNKQFTTPSSLRLLSFAKMEGSEISEEVGEDSRAKRKIFVAGATGSTGKRIVEQLLAKGFSVKAGVRDLDKAKSTLSSANPSLQIIKADVTEGSDKLAEAIGDDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRNVKRFILISSILVNGASMGQLLNPAYIFLNVFGLTLVAKLQAENYIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLYEGSISRDQVAEVAVEALAYPEASYKVVEIVSRPDAAKRSYHDLFGSIRQR 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02869 289 PANTHER FLAVIN REDUCTASE-RELATED 50 287 - -
Vian1g02869 289 Pfam NAD(P)H-binding 61 258 IPR016040 -
Vian1g02869 289 CDD SDR_a5 56 271 - -
Vian1g02869 289 Gene3D - 41 279 - -
Vian1g02869 289 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 55 270 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02869 Vian-Chr1 45395147 45397217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02869 54 186 Monolignol Biosynthesis Gene Families AT2G33590 34.507 1.17e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02869 - - gmx:100812074 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02869 1 45395147 45397217 Vian1g02869 1 45395147 45397217 ECH