Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02852 ATGAGTTCAAGAGTAGATACTGATGAAGATAGTGATATCAAAGGTAGCATGTGGGATTTGGATCAGAAGCTTGACCAGCCTATGGATGAAGAGGCAGGAAGGCTTAAAAATATGTACAGAGAAAAAAAATTTTCTGCACTGTTGCTCCTGCGGCTTTCATTTCAGAGTCTTGGGGTAGTTTATGGAGACTTGGGCACTTCACCCTTGTATGTTTTCTACAATACATTTCCTAATGGTGTCAAAGATCAGGAGGATGTAATCGGAGCTCTTTCTTTGATTATTTACTCTCTTACCTTGGTACCACTCCTCAAATATGTTTTTGTTGTATTAAGAGCCAATGACAATGGGCAAGGTGGAACATTTGCACTTTATTCCTTGCTTTGCCGACATGCAAAGATAAAAACCCTTCCTAACCAGCATCGAACTGATGAAGAGCTAACGACATATAGTCGGTCTACATTCCATGAAAGGTCCTTTGCTGCAAAAACGAAAAGATGGTTAGAGGAACAAGAATCTGCAAGGAGTGTCATTCTTATTCTTGTTCTTGTTGGCACCTGCATGGTTATTGGAGATGGGATTCTTACCCCAGCTATATCTGTTTTATCAGCTGTTGGTGGCATCAAGGTAAACAAGCCTACAATGAGTAGTGGTGTTGTAGTGCTGGTTGCTGTGGTAATATTAGTTGGGTTCTTCAGTATGCAACATTATGGGACCGATAAAGTTAGTTGGCTCTTTGCTCCAATTGTTCTTCTTTGGTTTCTCCTAATTGGAAGTATAGGTATTTTTAACATCTGGAAGTACGGAAGCAGTGTTCTAAAAGCTTTTTCTCCAGTATATATATATCGCTATTTTAGAAAAGGAGGAAAAGAAGGCTGGACTTCCCTTGGTGGGATCATGCTCAGCATAACAGGGACAGAAGCTCTTTTTGCTGACCTAGCCCATTTTCCGGTCTCAGCTGTACAGCTTGCATTTACTCTAGTTGTATTTCCTTGTCTTCTTTTAGCCTATTCTGGTCAAGCTGCTTATCTTATGAATAATTTGAGCCATTCTCAAGATGCTTTTTACCGTTCAATTCCAGATAAAATATACTGGCCAGTATTTATTGTTGCAACATTGGCAGCCATAGTTGCAAGCCAGGCCACAATAACTGCAACTTTTTCAATTATTAAGCAAGCCCTTGCTCTTGGATGTTTCCCTAGAGTAAAAGTTGTATATACATCAAAGAAATTCCTTGGCCAGATTTATGTTCCAGATATTAATTGGATCCTTATGGTTCTTTGCATAGCTGTCACTGCTGGGTTTGAAAATCAAAACCAGATTGGAAATGCATATGGTACTGCAGTTGTGATAGTAATGCTAGTTACAACATTCCTTATGATTTTAATCATGATACTAGTGTGGCGCTGCCACTGGATTCTTGTCCTCATCTTCACTAGTTTATCATTGATTGTGGAATGCACCTACTTCTCCTCAGTCCTCTTCAAAGTTGATCAGGGTGGGTGGGTTCCACTTGCAATTGCTGGAGCATTTCTGATTATTATGTCTGTTTGGCATTACGGCACTGTGAAACGCTATGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTGGGTCTTGGCCCAAGTTTAGGACTTGTCCGGGTTCCTGGAATTGGATTGGTCTACACAGAACTTGCAAGTGGAGTGCCCCACATTTTTTCTCATTTCATTACCAACCTTCCAGCCATTCATTCTGTTGTTGTTTTTGTATGCGTGAAGTACCTTCCTGTCTACACAGTCCCAGAAGAAGAGAGATTCCTTGTCAAGAGAATTGGACCTAAGAATTTCCACATCTTTCGATGCGTGGCACGGTATGGCTACAAAGACCTGCATAAGAAAGATGATGATTTTGAGAGAAAACTCTTTGAGAATCTGTTCACATTCGTTCGGCTCGAGTCTATGATGGAAGGATGTTCAGATTCAGATGAATACAGTTTGTATGGACAGCAAATAGAGCATCCAAGAGATGGCCTTTTGCATAACAATGGAAGCACAGTTTCTTCCATTATGGATTTAACAATGTCTTCAGTAGATTCAATAGTACCAGTTAGATCACCACATGACATGAATATTACTGTCAGGTCTTCTGGACAAACAAGCAACCAGACCGAAGTAGATGAACTTGAATTTTTGAATAGCTGCAGGGATGCTGGGGTGGTTCACATTCTAGGAAACACAGTTGTGAGGGCAAGGAGAGAATCAAGGTTCTACAAGAAAATAGCTGTTGATTATATATATGCATTTCTTAGGAAGATATGCAGGGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAACGTTGGTCAAATTTTCTATGTATAG 2376 0.4007 MSSRVDTDEDSDIKGSMWDLDQKLDQPMDEEAGRLKNMYREKKFSALLLLRLSFQSLGVVYGDLGTSPLYVFYNTFPNGVKDQEDVIGALSLIIYSLTLVPLLKYVFVVLRANDNGQGGTFALYSLLCRHAKIKTLPNQHRTDEELTTYSRSTFHERSFAAKTKRWLEEQESARSVILILVLVGTCMVIGDGILTPAISVLSAVGGIKVNKPTMSSGVVVLVAVVILVGFFSMQHYGTDKVSWLFAPIVLLWFLLIGSIGIFNIWKYGSSVLKAFSPVYIYRYFRKGGKEGWTSLGGIMLSITGTEALFADLAHFPVSAVQLAFTLVVFPCLLLAYSGQAAYLMNNLSHSQDAFYRSIPDKIYWPVFIVATLAAIVASQATITATFSIIKQALALGCFPRVKVVYTSKKFLGQIYVPDINWILMVLCIAVTAGFENQNQIGNAYGTAVVIVMLVTTFLMILIMILVWRCHWILVLIFTSLSLIVECTYFSSVLFKVDQGGWVPLAIAGAFLIIMSVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHIFRCVARYGYKDLHKKDDDFERKLFENLFTFVRLESMMEGCSDSDEYSLYGQQIEHPRDGLLHNNGSTVSSIMDLTMSSVDSIVPVRSPHDMNITVRSSGQTSNQTEVDELEFLNSCRDAGVVHILGNTVVRARRESRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02852 791 NCBIfam potassium uptake protein 52 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian1g02852 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 41 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian1g02852 791 Pfam K+ potassium transporter 54 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02852 Vian-Chr1 44827954 44836823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02852 1 791 Inorganic Solute Cotransporters AT2G35060 79.419 0.0 1246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02852 K03549 - gmx:100794454 1508.04