Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02831 ATGAAGCTCCTCGCTTCATCTCCTTTATCGCGAAACACTTCCTCGCAATCTGCAAAACTTGAAACACAGAAAGCCCCAAATCTCTTCACACCAGAAACCCTAAATTGCGACTTCGCTCATCTTCCAACTACCGTGATGGAGCAACTCCTCCTTTATCGCGAGCCATCATCTTCGTTGACCTGCAAATCATATAGGGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAGCTGTATGATTTTCTGCAAAGTCCTGAAGATCTTGAGAGGCTTTATTGTGAAATTCATCTCCTGAAAACATTGAAGCATAGGAACATTATGAAAGGAAGATTATTGGATTGGTAG 357 0.423 MKLLASSPLSRNTSSQSAKLETQKAPNLFTPETLNCDFAHLPTTVMEQLLLYREPSSSLTCKSYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKGRLLDW 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02831 118 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 55 112 - -
Vian1g02831 118 Gene3D Phosphorylase Kinase; domain 1 53 114 - -
Vian1g02831 118 SUPERFAMILY Protein kinase-like (PK-like) 56 112 IPR011009 -
Vian1g02831 118 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02831 Vian-Chr1 44355423 44356420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02831 64 112 MAP Kinase Kinase Kinase AT3G22420 73.469 1.96e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02831 K08867 - gmx:100790554 106.301