Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02816 ATGGGTTTAGCGGCACCTTATTCCGTTGGAACAAGCCTCCCTTCCCTTCAACGCCTTCCTTCCCCGAAACCCCAAATCTGTAACAATTATTCATCTCCTGTTAGTTCCCACCGTCATGTGAAATGTGCTTTCCAACTTCAACCACAAACACCACCACCGACAACAACTGTAACAGTGGCACCGGACGAGAGCCTCGTGAAGAGAAGAACTGTCATAGGCCTTTTTGCATTTGATGCTGTCCTTGCTTATTCTTCCTTAAATTCATCACCAGCAGCTGAAACTCCATGTGAATTTCAAGTGGCACCTTCTGGTCTTGCCTTCTGTGATAAACTTGTGGGAGCAGGTCCTCAGGCAGTCAAGGGACAACTTATTAAGGCGCATTATGTGGGGAGATTGGAGAATGGGAAAGTTTTTGACAGCAGCTATAATCGTGGCAAGCCACTAACGTTTCGCGTTGGTGTTGGAGAGGTGATTAAAGGTTGGGATGAAGGCATTATTGGAGGTGATGGAGTTCCTCCCATGCTTGCAGGAGGGAAACGTACCCTGAAGATTCCTCCAGAACTTGGATATGGTTCAAGAGGAGCTGGTTGTCGAGGAGGCAAGTACTTCTTTCCTTTTGTTTTCTGCTGCTAA 633 0.4708 MGLAAPYSVGTSLPSLQRLPSPKPQICNNYSSPVSSHRHVKCAFQLQPQTPPPTTTVTVAPDESLVKRRTVIGLFAFDAVLAYSSLNSSPAAETPCEFQVAPSGLAFCDKLVGAGPQAVKGQLIKAHYVGRLENGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGIIGGDGVPPMLAGGKRTLKIPPELGYGSRGAGCRGGKYFFPFVFCC 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02816 210 FunFam Peptidylprolyl isomerase 93 208 - -
Vian1g02816 210 Gene3D - 93 205 IPR046357 GO:0003755
Vian1g02816 210 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 121 205 IPR001179 GO:0003755
Vian1g02816 210 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 90 202 IPR044183 GO:0009507
Vian1g02816 210 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 116 195 IPR001179 GO:0003755
Vian1g02816 210 SUPERFAMILY FKBP-like 97 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02816 Vian-Chr1 44035311 44037266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02816 87 195 Calmodulin-binding Proteins AT5G48570 38.393 1.04e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02816 K01802 - gmx:100778390 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02816 1 44035311 44037266 Vian1g02816 1 44035311 44037266 ECH