Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02796 ATGAGCGACAACGACTCAGACGCGTCTCTCTTTGCGAGATATGGTGGTTCGTTCAAGATGAATGACGATGGTGCATTCATGGTGGGATCTGTGGTGCTTTGTTGGTCATGGTGGTTCTGGTCTCCTTTCTTTGTTCTCCTCCCAAGCAAAGGCAAAGGCTTGTTCGCGGCTGTCAACGAGTTCAAAGTAGCGAAACTGAGGGAAGATGATCGAGTTTGCATTCGAGGCTCCGCCAACTTCTATCGAGCGAGGGTTCCATTGGCCCTTCCGTCGAACTCGACTATGACCCTCGATGTGATCATCGGAACCGTTGGTGACTGTCACGTCCTCCCGACCACCTCCGTCGGTGCTGCTAGGGGCGACCAAATTCGAAGATACATCTCGTTGGCCTCACAATTATGGTCGCCACCCACAACAACCATTTTATTCAAGGGCACGAGGGTTGGGGTTAAGCCAGCACCAAAGGTGGCATCTTTCTCGGCTAGAGGGCCTAATTCGGTTTCCCCTGAGATTTTGAAGCCCGATGTGATTGCGCATGGATTTAACATTCTTGCAGCATGGCCTTCTTCCATTCCTCCTTCTTCCCTTCCTTCCGACCACCGTACCACTGACTTCAAGATACTCTTCGGCACCTCTATGGCATGCCCTCATGTCTCTGGAGGTGGAGGGACCTTATTGGACGAGTTCACTGGGAATGCTTCTTCGGTCTTTGATTATGGGTTTGGCCACGTTCACCCGGGGAAGGCCATCAACCCCGGTCTAGTCTATGACATTTCCACCTACGATTATGTCGATTTCCTCTGCAATTCCAACAACACTACCCATAATATTCAGGTTATCGCTAGAAAGGCTGCAGACTGTAGTGGAGCAAAGAGGGTTGATCACGTGATGATTTTTGCACGGGTTGGGCGAAGATGA 918 0.5087 MSDNDSDASLFARYGGSFKMNDDGAFMVGSVVLCWSWWFWSPFFVLLPSKGKGLFAAVNEFKVAKLREDDRVCIRGSANFYRARVPLALPSNSTMTLDVIIGTVGDCHVLPTTSVGAARGDQIRRYISLASQLWSPPTTTILFKGTRVGVKPAPKVASFSARGPNSVSPEILKPDVIAHGFNILAAWPSSIPPSSLPSDHRTTDFKILFGTSMACPHVSGGGGTLLDEFTGNASSVFDYGFGHVHPGKAINPGLVYDISTYDYVDFLCNSNNTTHNIQVIARKAADCSGAKRVDHVMIFARVGRR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02796 305 Gene3D - 103 149 - -
Vian1g02796 305 SUPERFAMILY Subtilisin-like 154 251 IPR036852 GO:0004252|GO:0006508
Vian1g02796 305 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 107 287 IPR045051 -
Vian1g02796 305 Gene3D Peptidase S8/S53 domain 231 263 IPR036852 GO:0004252|GO:0006508
Vian1g02796 305 Gene3D Peptidase S8/S53 domain 150 221 IPR036852 GO:0004252|GO:0006508
Vian1g02796 305 Pfam Subtilase family 79 229 IPR000209 GO:0006508|GO:0008236
Vian1g02796 305 ProSitePatterns Serine proteases, subtilase family, serine active site. 210 220 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02796 Vian-Chr1 43686080 43697765 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02796 102 296 Subtilisin-like Serine Gene Family AT3G14240 58.590 1.58e-77 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02796 - - gmx:100784180 277.33