Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02771 ATGTCAGAGATTTGGCATGTTCTGAAGAAATCACTTCATTGCAGATCTCATTCATCAGAAGTTCATGATCCCCAGGCAAAAAGAATAGATCAGAGAAAAAAGGATGAGAGAAATAAAAGACAGTCAAAACACCAACTTAGCCATGAAATTTTCCTTGATAGATATAGTGGTGAGATTAAGATTTTTCCATGTTATCCTATAGAAGAACCTCCTTCTCATTCTCCTGCAAAATCCAAGCTAACTATAGTTTCATCAGAAACACTTTGTGTTGATTGTGATGAATGTGTTGTTTTCTCAAAGAAAAAGGTTCCAGTGAAAGATTCTAATGATCCCCCAATATCAACACGTCATCGTGAATGTGAAGACAAAATCAAATCTAGTGACACTGTTGAAGAACAGGGAAATTTCCATCTACATTCAGTGATCCAACTTGAGAGAGAAGATTCATCGAGTAAGATCATTGAACAAATATGCGAAGGTAACTTTACGGAAAGCAATGCAACAGAGATTGAATGTGTTATGAGAGTACAGAGCAAGCAAGAAACGTTTGCATGGTATGAGGAATGTAGGGAATTGGTAAGGGTGAAAGCGAAAAACCTAGAAAAGGAGCAGCCGAGATGCTTGGTTGATGGAAATGAACTGCTCAGATTTCATGGCACAACACTTGCATGTTCACTTGGTTCAAATGCTTCCTCTTCTACCGTTTGCACTTTAGACCTCTGTGGTGTCTGTCAAATTCTGAAGCATGGTTTTTACTCCAACCAAGAACTATTTAATGGTGCACTTGGGGTTTGCACCTCTTCTAGCAGTGCAAAAGCTATTCATTCAATTTGCTCACCCAATAACAAATCTGTGACCAGAAAATGTGTTATGCTGTGCAGAGTGATAGCTGGGAGAATCCATAATCCTCTACAAGAGATTGAGGAAATCACTCATACTGGGTTTGATTCTTTGGTAAAGAAAATGAGAGACCACTCAGAGATTGAAGAACTCGTTGTGTTAAATCCTAGAGCTGTGCTCCCTTGCTTTTTGGTAATCTACAATCTTTGA 1050 0.3857 MSEIWHVLKKSLHCRSHSSEVHDPQAKRIDQRKKDERNKRQSKHQLSHEIFLDRYSGEIKIFPCYPIEEPPSHSPAKSKLTIVSSETLCVDCDECVVFSKKKVPVKDSNDPPISTRHRECEDKIKSSDTVEEQGNFHLHSVIQLEREDSSSKIIEQICEGNFTESNATEIECVMRVQSKQETFAWYEECRELVRVKAKNLEKEQPRCLVDGNELLRFHGTTLACSLGSNASSSTVCTLDLCGVCQILKHGFYSNQELFNGALGVCTSSSSAKAIHSICSPNNKSVTRKCVMLCRVIAGRIHNPLQEIEEITHTGFDSLVKKMRDHSEIEELVVLNPRAVLPCFLVIYNL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02771 349 MobiDBLite consensus disorder prediction 17 45 - -
Vian1g02771 349 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 347 - -
Vian1g02771 349 Gene3D - 133 348 - -
Vian1g02771 349 SUPERFAMILY ADP-ribosylation 141 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02771 Vian-Chr1 42866652 42869265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02771 139 346 C2H2 Transcription Factor Family AT5G54630 47.248 7.94e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02771 - - vum:124838708 687.952