Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02770 ATGGCAGCCATCACACGCCACCGCACCTTCCCGCTCTACAATCGAACTTGCATAAAAACCAGACCTGCAAAGAAGAACCCAACAATCACAAATCGCGCACTGTTAGGCGCAGGACCCATGGCTTCCTCAAGCGGAACATGTTCGGGTTCATCCTCTCTGCTTCAGAACTCGGGTTCTGAGGAGGACTTGCAAGCGGTAATGGATCAGAGAAAGAGGAAGAGAATGACATCGAATCGCGAATCTGCACGACGATCTCGCATGAGGAAGCAGAAGCACTTGGACGATCTGGTTACCCAAGTGGCTCAGCTGAGAAAGGAGAATCAGCAGATACTCACCACCGTCAACATCACCACGCAGCAGTTCTTGAGCGTTGAGGTTGAGAACTCGGTGCTCCGGGCTCAGGTGGGTGAGCTGAGCCATCGGTTAGAGTCTCTGAACGAGATCATCGAACTCTGGTTGTGTGTGAGAAGGAGAGGGGAAGATGAAGTGGGAATTCCCACTGTGCCCTTTCTCTAA 516 0.5213 MAAITRHRTFPLYNRTCIKTRPAKKNPTITNRALLGAGPMASSSGTCSGSSSLLQNSGSEEDLQAVMDQRKRKRMTSNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTTVNITTQQFLSVEVENSVLRAQVGELSHRLESLNEIIELWLCVRRRGEDEVGIPTVPFL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02770 171 MobiDBLite consensus disorder prediction 36 91 - -
Vian1g02770 171 Pfam bZIP transcription factor 70 114 IPR004827 GO:0003700|GO:0006355
Vian1g02770 171 SMART brlzneu 66 130 IPR004827 GO:0003700|GO:0006355
Vian1g02770 171 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 73 88 IPR004827 GO:0003700|GO:0006355
Vian1g02770 171 PANTHER BZIP TRANSCRIPTION FACTOR 44 42 152 - -
Vian1g02770 171 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 68 131 IPR004827 GO:0003700|GO:0006355
Vian1g02770 171 SUPERFAMILY Leucine zipper domain 70 122 IPR046347 GO:0003700|GO:0006355
Vian1g02770 171 Coils Coil 86 113 - -
Vian1g02770 171 MobiDBLite consensus disorder prediction 64 91 - -
Vian1g02770 171 FunFam BZIP transcription factor 68 119 - -
Vian1g02770 171 CDD bZIP_plant_GBF1 71 121 IPR045314 GO:0003700|GO:0006355
Vian1g02770 171 Gene3D - 68 123 - -
Vian1g02770 171 MobiDBLite consensus disorder prediction 41 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02770 Vian-Chr1 42832243 42832758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02770 64 171 bZIP Transcription Factor Family AT4G34590 58.333 2.92e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian1g02770 bZIP_1 2.3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02770 K25786 - gmx:100101862 182.956