Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02766 ATGTTGGAAGAACAAATACCAAAGTCTCAACATTCTGGCATTCCCCATCACCTTCTTGCCATCATTGACGACCCTGATTACGACTCCACCATTCATGACTTCTGCAACCATGTACTTCTCGCTCTTGATACCATCGTTCAAAACGGACACCTACCCATTATCGTGGGTGGCTCCAACACTTACCTCACACCCTTGCTTGAGGACCCTGACGTTGCTTTTCGTTCCAAATATAATTGTTGTTTCATCTGGGTCGATGTGTTGTTACCAGTATTGTTTCCGTATCTGGACAAAAGGGTGGACAAAATGGTTGATGCAGGAGTTGTGGATGAGATTCGAGAAGCTTTTGTTGCTGGACCAGATTGCAGTCGTGGAATTAGAAGAGTCATTGGGGTTCCTGAGCTTGAAGAATTTTTCCTTCTGGAGAAACAAGTGTACACAATATTAATCAATCAATTTAAATATAGTTGTCCAACAACAATCCGGTATCCGGTTCCAGGGAAGGTGTGCGCGTGTGTTATCGGTTGTGGTGTGTGTATTAATTGGACTTCCATAGCTCCAGCATTGGAGAGCTCCACCGTGTTAACCTTCGTGCATGAAAGCGATGGTGGCTTTGGGGTTGACGACAACGACGTAGATGATGGAGAACAAGATGAAGGTTTGTTTGGTGGAGGAGAGGTTTATGGGGATGGACGTGGAGAGGAGGTAGACGACGGTGAAGTGGAGGGAGATGTGGCTATAATGAAGGATATTGGATTCAATGCCTACAGGTTCTCCATCTCTTGGCCAAGAATACTACCTCGTGAGAAACTATAA 813 0.4514 MLEEQIPKSQHSGIPHHLLAIIDDPDYDSTIHDFCNHVLLALDTIVQNGHLPIIVGGSNTYLTPLLEDPDVAFRSKYNCCFIWVDVLLPVLFPYLDKRVDKMVDAGVVDEIREAFVAGPDCSRGIRRVIGVPELEEFFLLEKQVYTILINQFKYSCPTTIRYPVPGKVCACVIGCGVCINWTSIAPALESSTVLTFVHESDGGFGVDDNDVDDGEQDEGLFGGGEVYGDGRGEEVDDGEVEGDVAIMKDIGFNAYRFSISWPRILPREKL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02766 270 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 4 140 IPR039657 -
Vian1g02766 270 Gene3D Glycosidases 195 270 - -
Vian1g02766 270 Gene3D - 5 87 IPR027417 -
Vian1g02766 270 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 88 143 - -
Vian1g02766 270 Pfam IPP transferase 6 68 - -
Vian1g02766 270 Pfam IPP transferase 75 141 - -
Vian1g02766 270 Pfam Glycosyl hydrolase family 1 240 267 IPR001360 GO:0004553|GO:0005975
Vian1g02766 270 SUPERFAMILY (Trans)glycosidases 240 268 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02766 Vian-Chr1 42801269 42803883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02766 1 80 C2H2 Transcription Factor Family AT2G27760 28.049 6.58e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02766 K10760 - gmx:121173984 232.646