Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian1g02756 | ATGATTGGAAGCAAAGATCGTGTTGCTGAATCGGAGGGTGAGAACTCTAGGAGCAAGTTTTCAAGGCACTATTTTGGGGCAAACAAGGAGTACCCAGATGAGAAAGGTGTTTTATTTCTGAGAGATTCACAGATGGGTGGTGGTGGAGGTGTTGATGGGGTTCTTCGTCCAAAACCCACCGAGGTTGTTGTTGGAAGCTTGGGGTTCCAAGAGTTGACCCTCAGCTACCTTTGTGACAACCCAAAACTCAGTTTTTCTGAGAAAGAGAATCCTGGTAAAAGCTTGCTGAGTTCCTTTGAGAGAATAAGCCACAAAGGGAAAGAGGTTGTGGTTTGTGAGAACTCAAATCAGGATGGCAAATGGGTGGAAAGAGATTTCCTCAGCTTGAGTGAGCCAAGAGAGGATTCTTCAAAGAGATCCCTTGAGGAAGTTGTTGAGAGGGAGAGTAATAAGGAAAAGAAGCAAAAACTGGAGACCCTCAATCTCTCTCTTGCTTTGCCTGATGTTTCACTTTCCCTCACTGCTTCAAACGCCTTGCAAAATGGTGATCAACTAGTTAGGAATAAACCTTCTAGGCCATCCGCTACTCACACTTCATACTCCAATGACTACACAGCAGCTTCTTTGTCTTACTCCTATTCCCACCCATTCTCTCACAACCCAAGCTGCTCACTTACCCGCAATTCAACCGATAATTTTGAGTACTCGGTGAGCAAAGATGACCAAATTTGGAACTGTGGAGAGGGGACCAATGGGTCTGTTCATAGTAGGTTCAAGCCAATAGGAGATGGCGTTGCTTTGACCAGCCATGGTGCTGGTATTAGTTCCTTTATGCAAGGTAATAGTCAGTATAAAACTACTAGTTCAGATAACCATTCTTTTTTCCCTTCGGAGTTGCCTGCCAGGCCAAGGCTTGAGGCTCACTCAGGGGACTCAAGGGGTAGGAACTCTGATAACCTGAGAATCTTGGATGGCTTGGATGATGGGAAGGTAAGGAAGCATTCCAGGCCAGAGAGAATTATTAGGGAGATTGTTTCAGAGTCTATCACTGTCATGGCATTGACAATTCAGGAGCTTACCGATGATGTCATAGCATCAAGTAAGGAATACTTAAAGAATCTCATTGAGAAGCCTGACAAGAAAGAGGAACTGGTAAGCCTCCAAAACCGGCTTGATAGAAGATCTGACCTAACAAAGGAGAGTCTTTCAAAGTGCCACAAAGCACAGTTAGAGATTTTAGTGGCTCTCAAGATGGGGCTTTCTAGCTTCCTTTCTAGCAAAGTTCAGTTGTCTGAGATGGTAGAGATTTTCTTGTATAAGAGATGTAGGAATGTAACCTGCATGAGTTTGCTTCCTGTTGATGATTGTGACTGCAAGATTTGCTCAGTAAATAAGGGCTTTTGTAGTTCTTGCATGTGTCCTGTATGTTTGAACTTTGATTGTGCAAATAGCACTTGTAGTTGGATAGGATGTGATGTTTGTTCTCATTGGTGCCATGCTACCTGTGGCATTCAGAGAAATCTTATCAAGCCTGGACCTAGCTTGAAGGGTCCTTCTGGGACCTCAGAGGTGCAGTTTCATTGTCTCGGATGTGGACATGCCTCGGAAATGTTTGGTTTTGTAAAAGACGTGTTTCTGTATTGTGCAAAGGATTGGGGTCTTGAAACCTTGATGAAAGAGCTTGACTGTGTAAGGAGGATCTTCAGGGCAAGTGAAGATCGCAAAGGGAAGGAATTGCATGTTAAAACTGATGACTTGCTATTAAAGCTTCAAACTAAATTGGTATCTCCTTCGGAAGCTTGCAATTACATCGTACAATTTTTCAACTACGCAGACAGCATGTCAGATTTTCCTGCTTCTGGTGGTATTTCTTCAAAGGATTTGGCAGCCTCTCAAACTAACCTTACAAAGGGTATACCATCTCTTTCAAAACCTAACCCTCTATTACCAAATTATGGTTATGAGATGGGCTATTCTAGGTCACATCCTGATGCCATGTCAAGTGAAGTACTTCAGAAAGACCTCAAAGCTTCCATGTTGAGTGAACTGAAAAATGAGGCTGATTTCCATTTGGGGGCTTTATTAAGAAAAGGTGGACTTGAAAGTTTGGGGAGCATTGTGAGGATAAAGGAGGCAGAAGCCAGAATGTTCCAAACCAAGGCAGATGAAGCAAGAAGAGAGGCAGAAGGGTTCCAGAGGATGATCAGGACGAAGACTGCCCAGATGGAAGAAGAATATGCTGAAAAGCTTTCCAAACTCTGCTTGCACGAGACTGAGGAAACACAGAGGAAGAAAATGGATGAACTCAAAGTCTTGGAAAATTCCTATTTTGATTACTATAAAATGAAAAAGAGAATGCAAGAAGAGATTGATGGTTTGTTGCGGAGAATGGAGGCAACAAAGCAGCAATGGGTTTAG | 2418 | 0.4313 | MIGSKDRVAESEGENSRSKFSRHYFGANKEYPDEKGVLFLRDSQMGGGGGVDGVLRPKPTEVVVGSLGFQELTLSYLCDNPKLSFSEKENPGKSLLSSFERISHKGKEVVVCENSNQDGKWVERDFLSLSEPREDSSKRSLEEVVERESNKEKKQKLETLNLSLALPDVSLSLTASNALQNGDQLVRNKPSRPSATHTSYSNDYTAASLSYSYSHPFSHNPSCSLTRNSTDNFEYSVSKDDQIWNCGEGTNGSVHSRFKPIGDGVALTSHGAGISSFMQGNSQYKTTSSDNHSFFPSELPARPRLEAHSGDSRGRNSDNLRILDGLDDGKVRKHSRPERIIREIVSESITVMALTIQELTDDVIASSKEYLKNLIEKPDKKEELVSLQNRLDRRSDLTKESLSKCHKAQLEILVALKMGLSSFLSSKVQLSEMVEIFLYKRCRNVTCMSLLPVDDCDCKICSVNKGFCSSCMCPVCLNFDCANSTCSWIGCDVCSHWCHATCGIQRNLIKPGPSLKGPSGTSEVQFHCLGCGHASEMFGFVKDVFLYCAKDWGLETLMKELDCVRRIFRASEDRKGKELHVKTDDLLLKLQTKLVSPSEACNYIVQFFNYADSMSDFPASGGISSKDLAASQTNLTKGIPSLSKPNPLLPNYGYEMGYSRSHPDAMSSEVLQKDLKASMLSELKNEADFHLGALLRKGGLESLGSIVRIKEAEARMFQTKADEARREAEGFQRMIRTKTAQMEEEYAEKLSKLCLHETEETQRKKMDELKVLENSYFDYYKMKKRMQEEIDGLLRRMEATKQQWV | 805 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian1g02756 | 805 | MobiDBLite | consensus disorder prediction | 281 | 321 | - | - | |
Vian1g02756 | 805 | CDD | PHD_OBE1_like | 472 | 531 | IPR047578 | - | |
Vian1g02756 | 805 | MobiDBLite | consensus disorder prediction | 304 | 321 | - | - | |
Vian1g02756 | 805 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 552 | 571 | IPR004082 | - | |
Vian1g02756 | 805 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 740 | 762 | IPR004082 | - | |
Vian1g02756 | 805 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 394 | 409 | IPR004082 | - | |
Vian1g02756 | 805 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 701 | 721 | IPR004082 | - | |
Vian1g02756 | 805 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 355 | 377 | IPR004082 | - | |
Vian1g02756 | 805 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 479 | 499 | IPR004082 | - | |
Vian1g02756 | 805 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 433 | 454 | IPR004082 | - | |
Vian1g02756 | 805 | Pfam | Coiled-coil region of Oberon | 666 | 794 | IPR032535 | - | |
Vian1g02756 | 805 | Coils | Coil | 707 | 741 | - | - | |
Vian1g02756 | 805 | MobiDBLite | consensus disorder prediction | 281 | 295 | - | - | |
Vian1g02756 | 805 | Pfam | PHD - plant homeodomain finger protein | 442 | 566 | IPR032881 | - | |
Vian1g02756 | 805 | Coils | Coil | 755 | 775 | - | - | |
Vian1g02756 | 805 | MobiDBLite | consensus disorder prediction | 132 | 153 | - | - | |
Vian1g02756 | 805 | Coils | Coil | 783 | 803 | - | - | |
Vian1g02756 | 805 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Vian1g02756 | 805 | Coils | Coil | 138 | 158 | - | - | |
Vian1g02756 | 805 | PANTHER | VERNALIZATION-INSENSITIVE PROTEIN 3 | 103 | 804 | IPR004082 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian1g02756 | Vian-Chr1 | 42492952 | 42496752 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian1g02756 | 442 | 539 | PHD Gene Family | AT5G57380 | 28.571 | 2.09e-07 | 52.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian1g02756 | - | - | gmx:100820216 | 1395.56 |