Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02734 ATGGATCTGCTACGGTCGGAGCCTATGCAAATGGCTCAATTGATCATTCCAATCGAATCAGCTCATCGAGCCATCTCTTACCTTGGCGATCTCGGCCTCTTCCAGTTCAAAGATCTCAATGTAGATAAAAGTCCATTCCAGCGAACTTATGCTTCTCAGATTAAACGATGTGGGGAAATGGCGCGTAGGCTACGGTTGTTTAAGGACCAAATGTTGAAAGCAGGCGTGTCACCCTCAACGAGCTCAGCAAGAAAGGATAATGTTGATCTGGAAATTTTGGAGGTTAAACTTGAAGAACTTGAAGCTGACCTCCTTGAGATTAATGCAAATAATGAGAAGTTGAAACACACCTACAATGAGCTATCGGAGTATAAGCTTGTTCAAGAGAAGGTTGGTGAATTTTTCTCTTCAGCAAAAAGTAATGCCGTAGCTCAACAGAGAAAGCTTGAAGTCCAGATAACTGTTGAAAGGTCTATTGACAGCCCATTACTATTGGAACAGGAGGAGACGTCAACAAAGCAAATTAAGCTGGGCTTTATCAGTGGACTTGTTTCAAGGGAAAAATCAGTTCCTTTCGAAAGAATTCTATTTCGTGCTACTAGGGGAAACGTGTTTCTCAAACAGACTGTGGTTGATCATTCTGTTCTTGATCTTTCGTCAGAGGAGAAGGTTTCAGGAAGACTTTCAGAATTGAAGACTACAATAGATGCAGGATTGCTTCACCGGAGCACTCTATTGCAGACAATGGCAGATCACTATGAGCAGTGGAGTCTTAAGATTCACAAAGTGTTGCAGCAGGCAACTGTGGAATGCAGTTCTCAAGTTGAGGCGATATTTCAGGTCTTAGAGACAAAGGAATCACCGCCTACCTACTTCTGCACAAACAAATTCACTTCTGCTTTTCAAGAAATTGTAGATGCCTATGGGTAA 930 0.4226 MDLLRSEPMQMAQLIIPIESAHRAISYLGDLGLFQFKDLNVDKSPFQRTYASQIKRCGEMARRLRLFKDQMLKAGVSPSTSSARKDNVDLEILEVKLEELEADLLEINANNEKLKHTYNELSEYKLVQEKVGEFFSSAKSNAVAQQRKLEVQITVERSIDSPLLLEQEETSTKQIKLGFISGLVSREKSVPFERILFRATRGNVFLKQTVVDHSVLDLSSEEKVSGRLSELKTTIDAGLLHRSTLLQTMADHYEQWSLKIHKVLQQATVECSSQVEAIFQVLETKESPPTYFCTNKFTSAFQEIVDAYG 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02734 309 Pfam V-type ATPase 116kDa subunit family 259 309 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vian1g02734 309 Pfam V-type ATPase 116kDa subunit family 27 225 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vian1g02734 309 Coils Coil 83 117 - -
Vian1g02734 309 PANTHER VACUOLAR PROTON ATPASES 259 309 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02734 Vian-Chr1 41809034 41815613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02734 1 309 Primary Pumps ATPases(2) AT4G39080 52.296 2.72e-126 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02734 K02154 - gmx:100805813 458.759