Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02671 ATGTTACAGATTATAGCAATTGACGTGGATAGAGAAGCATATGAGACTGGATTGCCCTTCATCCAGAAGGCAGGAGTGGAGGACAAAATTGACTTTATCCAAGCAGATGCATTATCCGCCCTGAATGATCTCGTTGAAGGAAACCATGGCGAGTCATTTGACTTCGTATTTGTAGATGCTGACAAGGAAAATATGATAAAGTATCACGAGGCGTTGTTAAAATTGGTGAAGAAGGGTGGAACAATTGCATATGACAACACCTTATGGCTTGGTACAGTGGCTATGTCTGAGGATGAGAAATTGGAAGATAAATTCTGGAAACACAGGAAGCCTACTCTAGAATTCAACAGTTACATAGCAAATGATTGTCGCATAGAATCAACTATTGTTTCTATTGGAGACGGTGTAACTCTTTGTCGACGCATCTGA 429 0.4056 MLQIIAIDVDREAYETGLPFIQKAGVEDKIDFIQADALSALNDLVEGNHGESFDFVFVDADKENMIKYHEALLKLVKKGGTIAYDNTLWLGTVAMSEDEKLEDKFWKHRKPTLEFNSYIANDCRIESTIVSIGDGVTLCRRI 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02671 142 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 142 IPR002935 GO:0008171
Vian1g02671 142 Pfam O-methyltransferase 3 142 IPR002935 GO:0008171
Vian1g02671 142 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 141 IPR029063 -
Vian1g02671 142 CDD AdoMet_MTases 3 84 - -
Vian1g02671 142 PANTHER O-METHYLTRANSFERASE-RELATED 3 142 - -
Vian1g02671 142 Gene3D Vaccinia Virus protein VP39 2 142 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02671 Vian-Chr1 39959212 39965221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02671 2 142 Monolignol Biosynthesis Gene Families AT1G67980 53.901 4.12e-47 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02671 K00588 K13272 gmx:100813350 225.713