Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian1g02670 | ATGCCAACATTCTTCTCCTTTCAAACCTCGTTACTTGTTTCTCTTGCCCTAGCGCTTGCCCTTACACCAATAACAACAACGACAAAGTTCCAATTCCAGAACGCCCTCTCCTTTTCCCCACTCGCCACTCTCTTTGTCACCCTCTTCGCTGTTTCCCTTAACTACTGGCTTGTCCCTGGAGGTTTTGCATGGAGAAACTATCGATTCCAACATCATCCCAACAACGAAAAACCAGACGCAAAACTTTCTGGGCCTATGGGGTGGCCCATACTGGGCTCTCTGCCTCTAATGGGATCTCTGGCGCACGCCAAACTCGCTGCTTTAGCCGCGTCGTTAAACGCCAAGAGGATAATGGCGTTCAGCCTGGGACCCACTCCGGTTGTTATAAGCAGCCACCCCGAGACTGCCAGACAAATCTTATTCGGATCCTCCTTTTCGGATCGTCCCATAAAAGAATCCGCTCGCGCTCTCATGTTTGAGCGAGCCATTGGTTTCGCTCCTTCCGACACCTACTGGAGGCACCTTCGTAGGATTGCGGCGTTCCACATGTTCTCTCCGAGGAGGATTCAGGATTTGGAGGGCGTCCGGCAGCGAGTGGCTGAGGACATGGTGAAGAGCGCGTGGAAGGAGATGGAGGAGAAAGGGGTGGTGGAAGTTCGGGGCATACTTCAGGAAGGATCTCTGTTGAATATTTTGGAGAGTGTGTTTGGGAGTAATGATAAGAGTGAGGAGTTGGGTGGTATGGTTAAGGAAGGGTACGAGTTGATTGCGAAGTTCAACTTGGAAGATTATTTTCCTCTCAAGTTTTTGGACTTTCATGGGGTGAAGAGAAGGTGCCACAAGTTGGCCGCTAAGGTCGGTAGTGTTGTGGGGCAAATTGTGGAGGAGCGAAAACGAGATGGGAGTTTTGTTGGGAAGAATGATTTTCTTAGCACTTTGTTATCCTTACCCAAAGAAGAAAGGTTGGATGATTCAGATATGGTGGCTATTCTGTGGGAAATGGTATTTCGAGGAACAGACACGGTTGCAATACTCCTAGAATGGGTCATGGCCAGGATGGTTTTACACCAAGACGTACAAAAGAAAGCCCGGGAAGAAATCGACACGTGCATCAGCCAAAATCGTCACGTGCGAGACTCGGATATTTCGAACCTGCCTTACCTCCAGTCCATAGTGAAAGAAGTTCTCCGGCTGCACCCTCCGGGTCCACTACTCTCATGGGCCCGCCTCGCAGTCCACGATGTCTACGTGGATAAAGTACTTGTGCCAGCTGGCACAACAGCCATGGTTAACATGTGGGCAATATCGCATGACTCGTCCATCTGGGAGGACCCATGGGCTTTCAAACCGGAGAGGTTCCTAACAGAAGACGTTTCCATCATGGGGTCGGACTTGAGGCTGGCCCCCTTCGGAGCTGGACGTAGGGTGTGTCCGGGAAGGGCCTTGGGCTTGGCCACGGCCCATCTCTGGCTCGCGCAACTTCTCCGCCACTTCACATGGCTCCCGGCGCAACATGTGGATCTTTCGGAATGCCTTAAGCTTTCCATGGAAATGAAGACCCCTCTGCGATGCGTAGTGGTTCGTAGATAA | 1590 | 0.5138 | MPTFFSFQTSLLVSLALALALTPITTTTKFQFQNALSFSPLATLFVTLFAVSLNYWLVPGGFAWRNYRFQHHPNNEKPDAKLSGPMGWPILGSLPLMGSLAHAKLAALAASLNAKRIMAFSLGPTPVVISSHPETARQILFGSSFSDRPIKESARALMFERAIGFAPSDTYWRHLRRIAAFHMFSPRRIQDLEGVRQRVAEDMVKSAWKEMEEKGVVEVRGILQEGSLLNILESVFGSNDKSEELGGMVKEGYELIAKFNLEDYFPLKFLDFHGVKRRCHKLAAKVGSVVGQIVEERKRDGSFVGKNDFLSTLLSLPKEERLDDSDMVAILWEMVFRGTDTVAILLEWVMARMVLHQDVQKKAREEIDTCISQNRHVRDSDISNLPYLQSIVKEVLRLHPPGPLLSWARLAVHDVYVDKVLVPAGTTAMVNMWAISHDSSIWEDPWAFKPERFLTEDVSIMGSDLRLAPFGAGRRVCPGRALGLATAHLWLAQLLRHFTWLPAQHVDLSECLKLSMEMKTPLRCVVVRR | 529 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian1g02670 | 529 | PRINTS | E-class P450 group I signature | 389 | 407 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vian1g02670 | 529 | PRINTS | E-class P450 group I signature | 467 | 477 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vian1g02670 | 529 | PRINTS | E-class P450 group I signature | 111 | 130 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vian1g02670 | 529 | PRINTS | E-class P450 group I signature | 326 | 343 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vian1g02670 | 529 | PRINTS | E-class P450 group I signature | 477 | 500 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vian1g02670 | 529 | PRINTS | E-class P450 group I signature | 431 | 455 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vian1g02670 | 529 | PRINTS | E-class P450 group I signature | 346 | 372 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vian1g02670 | 529 | PRINTS | P450 superfamily signature | 468 | 477 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vian1g02670 | 529 | PRINTS | P450 superfamily signature | 337 | 354 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vian1g02670 | 529 | PRINTS | P450 superfamily signature | 390 | 401 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vian1g02670 | 529 | SUPERFAMILY | Cytochrome P450 | 84 | 529 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vian1g02670 | 529 | PANTHER | CYTOCHROME P450 78A7-RELATED | 29 | 529 | - | - | |
| Vian1g02670 | 529 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 470 | 479 | IPR017972 | GO:0005506|GO:0016705 | |
| Vian1g02670 | 529 | FunFam | Cytochrome P450 78A5 | 74 | 529 | - | - | |
| Vian1g02670 | 529 | Gene3D | Cytochrome P450 | 68 | 527 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vian1g02670 | 529 | CDD | CYP78 | 115 | 522 | - | - | |
| Vian1g02670 | 529 | Pfam | Cytochrome P450 | 84 | 514 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian1g02670 | Vian-Chr1 | 39932417 | 39934463 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vian1g02670 | 21 | 529 | Cytochrome P450 | AT1G13710 | 52.190 | 1.55e-180 | 516 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian1g02670 | - | - | gmx:100817944 | 873.233 |