Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02618 ATGGGTTCAGGTGATTGGTTTAAGACGATAATTAACTCAAGAAAATCAAAAGAAGGAAGGTCAAAGAAAGTAAAGACTAAGATTTATAAAGGGAAAAAGTCCAGCGGTTTAGCAAATGGCATTAAAAGCAAAAATCTAGAGTCAGCTGGAGTTTCAATTGAAACTATTGCTGCAACAAGGATTCAAACAGCATTCCGAGCTTATAAGGCTAGAAAACATTTACGTCGCTTGAGAGGATTCACAAAACTGAGAACCCTGACTCAAGGTTTCTCTGTTCAAAACCAAGCTAGTACAACTATAACTCATCTTCATTCATGGACCAAGATACAGGCTGAGATTAGAGCTCGTCGAATATGTATGGTGACAGAAGACAGGCTCAGACGGAAGAAACTACATTCTCAACTAAAACTAGAGGCCAAGATTCATGACCTTGAGGTGGAATGGAGTGGTGGTTCTGAAACCATGGAGAAAAGCCTTGCAAGGTTACACCTACGAGAAGAAGCATCAGTTAAACGGGAAAGAAGTATGGCATATGCCTTCTCTCATCAGTGGAGGGCCAACTCTACCCAAGGCCTAGGCAATTATGAACTTGGCAAAGCTAGTTGGAGTTGGAGCTGGAAGGACCGTTGGATTGCTGTACGCCCTTGGGAAAGCCGTGTCCCTAGTGTTACCATTAGCCCCAGGAAATATCAAAATAAGCTGTCAAGCAAAGTTAAAAAGGATAAGAAACCATCAACATCAAAACAACCAGTTTCAGTTAAAACTCCTTCAGCTAATGATAAAGGGACTAAACCCTTAGGTATTCCCAAAGGAACTGCTAAAGCTAGAAGAAGATTGTCTTACCCTGCTACAGAGAAAAAAACAGTGCATGAAGGAAAGCAATGA 885 0.4113 MGSGDWFKTIINSRKSKEGRSKKVKTKIYKGKKSSGLANGIKSKNLESAGVSIETIAATRIQTAFRAYKARKHLRRLRGFTKLRTLTQGFSVQNQASTTITHLHSWTKIQAEIRARRICMVTEDRLRRKKLHSQLKLEAKIHDLEVEWSGGSETMEKSLARLHLREEASVKRERSMAYAFSHQWRANSTQGLGNYELGKASWSWSWKDRWIAVRPWESRVPSVTISPRKYQNKLSSKVKKDKKPSTSKQPVSVKTPSANDKGTKPLGIPKGTAKARRRLSYPATEKKTVHEGKQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02618 294 PANTHER IQ-DOMAIN 5-RELATED 1 261 - -
Vian1g02618 294 ProSiteProfiles IQ motif profile. 54 82 IPR000048 GO:0005515
Vian1g02618 294 MobiDBLite consensus disorder prediction 231 294 - -
Vian1g02618 294 SMART iq_5 53 75 IPR000048 GO:0005515
Vian1g02618 294 MobiDBLite consensus disorder prediction 279 294 - -
Vian1g02618 294 Pfam IQ calmodulin-binding motif 57 75 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02618 Vian-Chr1 38211520 38214183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02618 1 283 IQD Protein Family AT2G33990 48.070 3.66e-80 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02618 - - gmx:100800675 456.062