Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02615 ATGGTATCAAAGGGTGGAAGGAAGGAGTTGGCAGAGAAGGATGCAGAGGATAACAGAGACTTGAAGGTGGAAGGTTTTGAGACAGTGAGAAAAGCTAAGGAACTAGTGGAGAAAAAGTGCCCTGGTGTGGTGTCTTGTGCAGATATTCTTGTAATTGCAGCCAGAGATTATGTTCACCTGGCAGGAGGGCCATATTACCCTGTGAAGAAGGGAAGATGGGACGGAAAGATATCAACGGCATCAAGAGTGGCATCAAACATCCCTCGTGCAAACTCGACCGTCGATCAACTCATCAAACTGTTCAATTCGAAGGGCTTAACCACACGGGACCTGGTAGCCCTATCGGGGGCCCACACAATTGGGTTTGCGCATTGCAAGAACTTCGTGGCTCGTCTCTACAGTTTCCGAGGCAAGGGCCAACCGGACCCAGACATGGACCCCAAACTCCTACACGCACTTAGAATGTACTGTCCAAACTTCGGTGGAAACTCCGACATCGTTGCCCCTTTTGATGCCACTACGCCTTTCTTGTTTGACCATGCCTATTATGGCAACTTGCAACAAAAGATGGGCTTGTTGGCCTCTGACCAGGCTCTGGCCATCGACCCACGAACCAAGCCTATTGTCTTAGAATTTGCCAAGGATAACCACAACTTTTTCCAAGCTTTTGTCGCAGCCATGGACAAATTGAGTTTAATCAAAGTCGTACGAGGGGCAAGGCACGGGGAGAAACGTAGAGATTGTAGCATGCACATGTGA 759 0.4901 MVSKGGRKELAEKDAEDNRDLKVEGFETVRKAKELVEKKCPGVVSCADILVIAARDYVHLAGGPYYPVKKGRWDGKISTASRVASNIPRANSTVDQLIKLFNSKGLTTRDLVALSGAHTIGFAHCKNFVARLYSFRGKGQPDPDMDPKLLHALRMYCPNFGGNSDIVAPFDATTPFLFDHAYYGNLQQKMGLLASDQALAIDPRTKPIVLEFAKDNHNFFQAFVAAMDKLSLIKVVRGARHGEKRRDCSMHM 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02615 252 Pfam Peroxidase 11 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 ProSitePatterns Peroxidases proximal heme-ligand signature. 110 120 IPR019793 -
Vian1g02615 252 PANTHER - 10 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 FunFam Peroxidase 88 230 - -
Vian1g02615 252 SUPERFAMILY Heme-dependent peroxidases 10 250 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 PRINTS Plant peroxidase signature 225 238 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 PRINTS Plant peroxidase signature 109 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 PRINTS Plant peroxidase signature 62 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 PRINTS Plant peroxidase signature 185 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 PRINTS Plant peroxidase signature 169 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 PRINTS Plant peroxidase signature 24 37 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 PRINTS Plant peroxidase signature 43 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 PRINTS Haem peroxidase superfamily signature 110 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 PRINTS Haem peroxidase superfamily signature 62 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 PRINTS Haem peroxidase superfamily signature 171 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 PRINTS Haem peroxidase superfamily signature 44 61 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 Gene3D Peroxidase, domain 2 88 230 - -
Vian1g02615 252 CDD secretory_peroxidase 11 249 IPR033905 GO:0004601|GO:0042744
Vian1g02615 252 ProSiteProfiles Plant heme peroxidase family profile. 1 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g02615 252 Gene3D - 9 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02615 Vian-Chr1 38149928 38153429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02615 3 252 Peroxidase AT2G34060 62.400 7.83e-116 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02615 K00430 - gmx:100777463 458.759