Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02607 ATGAAGAAGGTTCCCAAGAACAGCTGCAAGTCCGCATCGCACAGGCTCTTTAAGGACAAGGCGAAGAACCGTGTGGATGACCTGCAGGTGATGTTCCTCGATCTGCAGTTTGCTAGGAAGGAGAGTCGCACGGTTGATGCTGCAGTGCTTGAGGAGCAAGTTCATCAAATGCTTCGCGAGTGGAAGGCCGAGCTCAATGAGCCCTCGCCTGCATCTTCGTTGCAGCAAGGTGGCAGTCTTGGGTCATTCTCCACCGATATCTGTCGGCTATTGCAGCTTTGTGATGAGGAAGATGATGCCTCTAGTCCGTTAGCTGCTCCTAAGCCTGAACCAAATGATCAGACACTGCAGGCTAGGGGTAAGGTTGGCTTCCAAGAGATGGACCAACTTAACACAGCAAATCTACAATCAGGGCTTGGGGGTCCGGAGGGATATTACAGTGACAGAGACCCTCTGGTGGTAGGATTTGATCTGTCAACGGTGGCAAGAATGATGGGGCTGGGGGAAGTAAGTGAAGCACACCTTGGATTTTTGAAACTGAGATGGACTGTGGGCCAACAGCAACATGATTTTCCGTTGATTGATGAGTGCAAAAACTCAACCTCAAGTGTTCAAAACGCTGCAGCTAACAACCCAGATGGACATGCTTTAGAATATCATCAGTTTGATTTGCATCAGGACTATGATCATGGCTTTTACACTGGTTTTAATGGTACAGGTTATTGTGAGGAGGATGCTATTCCTCATATATCTAGCTACCTACCAAGTATCTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGACTGTCCAAGGCCTGCACAAGGGTTGGACTGGTGTCAAGACTACTGCAGTAGCTTTCATGCTGCCTTAGCTTTGAATGAAGGGCCACCAGGCATGGCCCCAGTTCTACGACCTGGGGGAATTGGTTTGAAGGATAATTTACTTTTTGCTGCCCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCGCCTGAGCTCTTTGATCTGTCTGTTCTTGAGGGTGAGACTATTAGGGAGTGGCTCTTCTTTGATAAGCCACGTAGAGCATTTGAGAGTGGAAACAGAAAACAAAGGTCATTGCCAGATTATAGTGGACGTGGTTGGCATGAATCTAGAAAGCAAGTCATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTATATGGATCCACAACCACTGAACCATTTTGAGTGGCACCTTTATGAATACGAGATTAGCAAGTGTGATGCATGTGCCTTGTACCGATTGGAACTGAAGCTTGTTGATGGTAAGAAGAACTCCAAGACAAAGTTAGCTAGTGATTCAGTCGCTGATCTGCAGAAGCAGATGGGAAGGCTCTCTGCTGAGTTTCCACATGACAACAAAAGGGCTGCCAAAGGCAGAACCAAAGTTAATTCAAAAGTTGGCATAGGTGGTGTCTATTCAGCTTCACACAGAGTGACTACACTGAATGGAGCGTATGAGTATGGGTTGGCTGCACCATATGACTATCTTGTTGAGAACATGGGCGACTACTATGGGACATGA 1608 0.4726 MKKVPKNSCKSASHRLFKDKAKNRVDDLQVMFLDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCDEEDDASSPLAAPKPEPNDQTLQARGKVGFQEMDQLNTANLQSGLGGPEGYYSDRDPLVVGFDLSTVARMMGLGEVSEAHLGFLKLRWTVGQQQHDFPLIDECKNSTSSVQNAAANNPDGHALEYHQFDLHQDYDHGFYTGFNGTGYCEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKTKLASDSVADLQKQMGRLSAEFPHDNKRAAKGRTKVNSKVGIGGVYSASHRVTTLNGAYEYGLAAPYDYLVENMGDYYGT 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02607 535 PANTHER TRANSCRIPTION FACTOR VOZ1 1 530 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02607 Vian-Chr1 38014127 38019218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02607 3 533 VOZ-9 Transcription Factor Family AT1G28520 65.009 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vian1g02607 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02607 - - pvu:PHAVU_003G073700g 912.909