Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02541 ATGGCGGGGAAGTCAGACACAGTGTCGATCCGCGTTCCTTACAAGAACCTCCACGACGATTCTTCCGCTCCCGAACTCGAACTCGTAGATGTCGACCACCGGGGCCACCGGATCCACGTCAACTCGCCGCCGTCAATTCACTCGCCTTCGCCGCCAAGCAACAGAGCTTCCTTGGTCAATCTCGTTCTCAGTTGCACCGTAGCCGCTGGCGTCCAATTCGGTTGGGCCTTGCAGCTCTCTCTCTTAACGCCCTACATTCAGACGTTGGGAATAGGACATGCTTTTTCTTCTTTTATCTGGCTTTGTGGTCCCATTACAGGCCTTGTGGTTCAACCCTGCGTTGGTGTTTGGAGTGATAAATGTACGTCGAGGTTTGGCAGAAGGCGGCCGTTCATTCTGGCAGGATCTCTTATGATATCTGTGGCTGTGATATTAATCGGATTTTCTGCAGACATTGGATATGTATTAGGTGATACACACGAGCATTGCAGAACATTTAAAGGAACCCGAACAAGGGCTGCTCTTGTATTTATTCTTGGGTTCTGGATGCTGGACCTTGCTAACAACACGGTGCAGGGTCCTGCTCGAGCACTTTTGGCTGATCTGTCTGGTCCTGATCAACGTAATGTGGCAAATGCTATATTTTGCTCATGGATGGCAGCTGGGAACATCCTAGGATATTCTTCTGGTGCTAGTGGAAAGTGGAACAAATGGTTCCCTTTCCTGACCACAAGAGCTTGCTGCGAAGCCTGTGGCAATCTTAAGGCAGCATTTCTTGTGGCTGTGGTGTTTCTGGCATTATGCACATTTGTCACCCTTTATTTTGCTGATGAGGTTCCACTTACCACTGCAAGTCAACATCATCACTTGTCAGATTTTTCTCCTTTATTGGATGAACAACAACAAAATGGTGTTGAATTTTCAAAATCAAGGCCTTTATCTGTTATGGGTGAATCCAATGACCAGAGAACTGAAGATCACATTGGGAAAGAGGCAGAGCTAAATCCTAAGAATTTCAAAGCTGGGGAAGATCATATTGAAAATGTAATGGATGGGCCTGGAGCAGTATTGGTAAACTTGTTGACAAGTTTAAGGCATTTGCCTCCTGCTATGCATTCAGTCCTGATTGTAATGGCTCTCACTTGGTTGTCATGGTTTCCCTTCTTTCTGTTTGACACGGATTGGATGGGGAGAGAAGTTTATCATGGTGATCCAAAAGGGGGCACTTCTGAAATAGATCTTTACGATCAAGGTGTTAGAGAAGGTGCATTTGGTTTGCTATTGAATTCAGTTGTCCTTGGAATTAGCTCTTTTTTCATTGAACCAATGTGTAAGTGGATGGGCACGAAATTGGTATGGGCGCTGAGCAATTTTATTGTCTTTGTCTGCATGGCTGGCACTGCTATCATTAGTCTGATTTCCATTCGAAATCATTCTGGAGGGATAGAACATGTAATTGGAGCAAGTGTAGCAATCAAGATTGCTTCCTTGGTTGTGTTTGTTCTTCTTGGTTTTCCTCTTGCGATTACCTACAGTGTACCCTTTGCTGTCACAGCAGAGTTGACTGCTGATTCAGGAGGTGGCCAAGGATTGGCCATAGGAGTTCTAAATCTTGCAATTGTTGTTCCTCAGATTGTTATATCCCTTGGTTGTGGTCCCTGGGATGCTCTCTTTGGTGGTGGAAATATTCCTGCCTTTGTTCTGGCCTCCGTTTGTGCTCTGGCTGGTGGTATAATTGCAACTCTCAAACTGCCAAATCTATCTAGCAATTTCCAGTCAACAGGATTTCATATGGGTTAG 1800 0.455 MAGKSDTVSIRVPYKNLHDDSSAPELELVDVDHRGHRIHVNSPPSIHSPSPPSNRASLVNLVLSCTVAAGVQFGWALQLSLLTPYIQTLGIGHAFSSFIWLCGPITGLVVQPCVGVWSDKCTSRFGRRRPFILAGSLMISVAVILIGFSADIGYVLGDTHEHCRTFKGTRTRAALVFILGFWMLDLANNTVQGPARALLADLSGPDQRNVANAIFCSWMAAGNILGYSSGASGKWNKWFPFLTTRACCEACGNLKAAFLVAVVFLALCTFVTLYFADEVPLTTASQHHHLSDFSPLLDEQQQNGVEFSKSRPLSVMGESNDQRTEDHIGKEAELNPKNFKAGEDHIENVMDGPGAVLVNLLTSLRHLPPAMHSVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGGTSEIDLYDQGVREGAFGLLLNSVVLGISSFFIEPMCKWMGTKLVWALSNFIVFVCMAGTAIISLISIRNHSGGIEHVIGASVAIKIASLVVFVLLGFPLAITYSVPFAVTAELTADSGGGQGLAIGVLNLAIVVPQIVISLGCGPWDALFGGGNIPAFVLASVCALAGGIIATLKLPNLSSNFQSTGFHMG 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02541 599 FunFam Sucrose transport protein SUT5 372 592 - -
Vian1g02541 599 Gene3D MFS general substrate transporter like domains 55 583 IPR036259 -
Vian1g02541 599 CDD MFS_SLC45_SUC 61 580 - -
Vian1g02541 599 MobiDBLite consensus disorder prediction 320 334 - -
Vian1g02541 599 FunFam Sucrose transporter SUC2 59 283 - -
Vian1g02541 599 Pfam MFS/sugar transport protein 76 224 - -
Vian1g02541 599 MobiDBLite consensus disorder prediction 311 334 - -
Vian1g02541 599 PANTHER SUGAR TRANSPORTER 55 582 - -
Vian1g02541 599 SUPERFAMILY MFS general substrate transporter 60 585 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02541 Vian-Chr1 36113770 36118696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02541 144 599 Sucrose Transporter Gene Family AT2G02860 68.410 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02541 K15378 - gmx:100793185 1094.34