Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02498 ATGGCGAAGAGTGAGTTAAAGGTGATTGGAAAATGGTCGAGTCCTTATGCTATGCGAGTGAAGATTGCCCTGAACATCAAAGCCCTTGAACATGAGCACTTTGAAGAAACGTTGAACCCCAAAAGCGACCTTCTTCTTCAATCCAACCCTGTCTATGGCAAAGTCCCAGTTCTCCTCCACCATGGCAGACCCATCTCTGAATCTTTGGTCATAGTTCAATACATAGATGAAACATGGTCCACTGATCCTCCTATCCTCTCCTCCGATCCTCACGATAGAGCTCTTGCTCGCTTCTGGGCTGCTTACGTAGATGATAAATGGTTTCCATCCATGAAAAGCATTATGACGGTTGAAGGAGAGGAGGAAAGGAAGCCATACTTTGAGGTGTTGGAAGAAGTACTTGAAAGGATGGAGGGTGCTTTCTGGAAATGCAGCAAAGGAAAGCCATTTTTTGCAGGAGACAGGATTGGATTCCTTGACATTGCTTTTGGGTGCTTCCTGGGATGGCTCAGTGTGATAGAACATAGATATGAAAGGAAACTGCTGGTTGAAGCAAAGGCTCCTGCTTTGGTGAAATGGGCTGAGAGATTTGCTGCTGACCCTGCTGTCAAGGGGCTTATACCTGAGACTGATAAGCTTGTTGAGATTTCCAAGTCTCTTCAGATCAAATGGAGAGCTGCAATTGGCAAGAACTAG 696 0.4569 MAKSELKVIGKWSSPYAMRVKIALNIKALEHEHFEETLNPKSDLLLQSNPVYGKVPVLLHHGRPISESLVIVQYIDETWSTDPPILSSDPHDRALARFWAAYVDDKWFPSMKSIMTVEGEEERKPYFEVLEEVLERMEGAFWKCSKGKPFFAGDRIGFLDIAFGCFLGWLSVIEHRYERKLLVEAKAPALVKWAERFAADPAVKGLIPETDKLVEISKSLQIKWRAAIGKN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02498 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 220 IPR010987 -
Vian1g02498 231 Gene3D Glutaredoxin 1 85 - -
Vian1g02498 231 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Vian1g02498 231 CDD GST_C_Tau 90 218 IPR045074 GO:0004364|GO:0006749
Vian1g02498 231 Gene3D - 86 228 - -
Vian1g02498 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vian1g02498 231 FunFam Glutathione S-transferase GSTU6 1 86 - -
Vian1g02498 231 SFLD Main (cytGST) 2 225 - -
Vian1g02498 231 SUPERFAMILY GST C-terminal domain-like 86 218 IPR036282 -
Vian1g02498 231 CDD GST_N_Tau 6 79 - -
Vian1g02498 231 FunFam Glutathione S-transferase U9 86 227 - -
Vian1g02498 231 Pfam Glutathione S-transferase, C-terminal domain 98 201 IPR004046 -
Vian1g02498 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 215 IPR045073 -
Vian1g02498 231 SFLD Main.3: Omega- and Tau-like 2 225 IPR045073 -
Vian1g02498 231 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02498 Vian-Chr1 35120584 35121409 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02498 1 220 Glutathione S-transferase Gene Family AT1G10370 56.561 4.52e-89 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02498 K00799 - cam:101508281 374.015