Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02491 ATGACAACCGTGGAGGCTATAGGGGCAGTGATGGAGATGATGGTGGCCAATGATGGTGGTGCAGGAAGAGGAGAAGAAGGAAAATGGATCATATTCCGATTCATAGTGGCAGAACTTATCGAAAATGATCTCATTTTAATTGGTAGCACAGCCATAGAAGACAAGCTTCAAGAGGGTGTACCTGCTTGCATAGAGACTCTTCAAAGAGCTGGTATTAAAATTTGGGTTCTTACAGGGGACAAGATTGAAACAGCTATAAACATAGCCTATGCATGCAACTTGATAAACAATGAGATGAAGCAATTTGTGATTAGTTCAGAAACTGATGCAATCAGAGAAGTTGAAGACAGGGGTGACCAAGTGGAGATTGCACGGTTTATCAAAGAAGAAGTGAAAAAAGAGCTGAAGAAATGCCTTGAAGAAGCACAGACTATTTTCACTCCCTATCTGGACCAAAATTAG 462 0.4113 MTTVEAIGAVMEMMVANDGGAGRGEEGKWIIFRFIVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIKEEVKKELKKCLEEAQTIFTPYLDQN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02491 153 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 36 129 - -
Vian1g02491 153 Gene3D - 43 149 IPR023214 -
Vian1g02491 153 Pfam haloacid dehalogenase-like hydrolase 48 120 - -
Vian1g02491 153 NCBIfam HAD-IC family P-type ATPase 45 95 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian1g02491 153 SUPERFAMILY HAD-like 39 96 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02491 Vian-Chr1 34982919 34991401 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02491 36 143 Primary Pumps ATPases AT1G59820 91.667 1.15e-61 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02491 K14802 - var:108321397 221.09