Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02469 ATGAAATACAACAACCCAATCACCATTTTCCTCTTCCTCTCCCTATCATTCCTCCCTTCCATGCAAAACAAACTCACTCCCGATTACTACAAAAAAACCTGCCCCACCTTCCTCGACACCGTCCGAAGAATCGTTAACGAAAAGCAGCATAACACGCCCTCCACCGCCGCCGCCACCCTCCGCCTCCTCTTCCACGACTGCATGGTCGGCGGCTGCGACGCCTCCATCCTCGTCACCTCCAATGCCTACAACAAGGCCGAGCGCGACCACACCGTCAACCTCCCCCTCTCCGGGGACGGCTTCGACGCCGTCTTGCGGGTCAAGAACGTCCTCGAGCTGGAATGCCCCAACGTCGTCTCGTGCGCCGACATCCTCGCTGCTGCCGCCGGCGAACTGGTGGCGAACTCCGGCGGCCCCACCTTGACTGTCCAATTCGGGCGAAAAGACTCCCTGGAATCCAAAATCTCCAGCTCTGAAAACCAGTTCCCATTACCGAACATGACTATGTCCCAAGTGATCACCCTCTTCACCAAAAAAGGGTTCTCTGTGCAGGAAATGGTGGCCCTTATCGGTGCACACACCATAGGGATGTCCCACTGCGACCAGTTCGCCCACAGGCTCTTCGGCTTCAGCAAAACTTCGGAAACTGATCCCGCCTATAGTCCCGAGTACGCGGCGGGGCTGAGGAAGCTATGTGAGAACTACACGAAGGACTCTACCATGGCGGCTTACAACGACGTGATAACTCCGGTTAAGTTCGACAACATGTATTTCAAGAACTTGCGGCGAGGGTTGGGGTTGCTGGCCACTGACTCCGCCCTCTTCACTGATCCCCGGACGAAGCCCTTCGTTGAAACCTATGCCGATGATGAAGGGAAGTTCTTTCAGGACTTCTCTCGCGCCATCGAAAAGCTCAGCGCCTTGGACATTAAAACTGGAAAGGAAGGAGAGGTGCGGAGCAGATGTGATTCTTTCAACTCGCTTAATTGA 990 0.5525 MKYNNPITIFLFLSLSFLPSMQNKLTPDYYKKTCPTFLDTVRRIVNEKQHNTPSTAAATLRLLFHDCMVGGCDASILVTSNAYNKAERDHTVNLPLSGDGFDAVLRVKNVLELECPNVVSCADILAAAAGELVANSGGPTLTVQFGRKDSLESKISSSENQFPLPNMTMSQVITLFTKKGFSVQEMVALIGAHTIGMSHCDQFAHRLFGFSKTSETDPAYSPEYAAGLRKLCENYTKDSTMAAYNDVITPVKFDNMYFKNLRRGLGLLATDSALFTDPRTKPFVETYADDEGKFFQDFSRAIEKLSALDIKTGKEGEVRSRCDSFNSLN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02469 329 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PANTHER - 8 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Vian1g02469 329 Gene3D - 28 326 - -
Vian1g02469 329 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 Gene3D Peroxidase, domain 2 163 305 - -
Vian1g02469 329 FunFam Peroxidase 163 305 - -
Vian1g02469 329 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 Pfam Peroxidase 44 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g02469 329 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Vian1g02469 329 CDD secretory_peroxidase 24 325 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02469 Vian-Chr1 34323520 34324509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02469 5 329 Peroxidase AT5G47000 53.517 9.55e-124 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02469 K00430 - gmx:100781063 487.263