Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian1g02407 | ATGGAAAGAACAACCCCAGTTGTCTATTTCCAATGCTTTATTTTCCTTCTCATGAAGACTGTGTTGTTATCGAAAACAGTGATTGCAGAACCAAGGGCCAATACTGTCAATACAACATGTGGCCACAAGTTAGAGCACAACTCCACTATCTTTGTTCCAAATTTTGTTGCAACGATGGAGAAGATTAGTGAACAGATGAGAATCACTGGTTATGGCACAGCAGTTGTAGGGACAGGAGGACCTGACACTAACTACGGCTTGGCTCAGTGCTATGGTGATCTCTCATTGCTTGACTGTGTTTTATGTTATGCCGAGGCACGTACGGTTCTTCCCCAATGCTTCCCTTACAATGGTGGTCGCATATACCTTGATGGTTGCTTCATGAGGGCTGAAAACTACAGCTTCTTTGATGAGTACACAGGGCCGGGAGACAAGGCTGTTTGTGGAAATACAACAAGGAAGAATACAACTTTTCAAGCAGCAGCGAAGAAGGCTATTATGACTGCAGTTCAAGCTGCACCAAACAATAAAGGGTATGCTAGGACGGAGGTTGCTGTAGCAGGAACAGCAAATGACTCAGCTTATGTTCTGGCTAACTGTTGGAGGAGCTTGGACGCAAAGTCTTGCAAAGCTTGTCTTGAGAATGCATCTACTTCCATATTGGGGTGCCTTCCCTGGTCAGGAGGGCGAGCACTTAACACTGGATGCTTCATGAGGTACTCAGACACAGATTTTCTTAACAAGGAAGAGGAAAATGGGAGTTCAGGAGATAATGTATTAGTGATAGTGATTGCAGTAGTCAGTTCAACTATTGTTTTGGTGGTTGGAGTATCCCTTCTGCTTTATATCCGCAAACACAGATACGTTCAAATGAAACGAAGAGGTTCAAATGATGCAGAAAAGTTAGCCAAAAGTCTTCACCGCAATAGCTTGAACTTCAAATACTCTACACTGGAGAAGGCTACTAATTCTTTTGATGAAGCTAACAAGCTTGGTCAAGGAGGATTTGGAGCAGTTTATAGAGGAGTTCTGCCTGATGGAAGAGAGATTGCTATCAAGAGATTATATTTCAACAACAGGCATAGAGCAGCTGATTTCTACAATGAAGTCAACATAATTAGTAGTGTGGAACACAAAAATCTTGTCAGACTCTTAGGATGCAGTTGCTCAGGACCTGAAAGTTTTCTTATATATGAATTTCTACCTAACAGGAGTCTTGATCGCTTCATATTTGATCAAAACAAGGGTAGAGAACTAAACTGGGACAAGAGATATGACATTATCATCGGGACAGCTGAAGGATTAGTTTACCTACATGAGAACTCCAATATTAGAATAATCCACAGAGATATAAAAGCCAGCAACATCTTATTGGATGCAAAGCTTCGCGCTAAAATTGCTGATTTTGGTCTGGCTAGGTCCTTTGAAGATGACAAGAGCCACATTAGCACAGCTATTGCTGGAACTTTAGGTTACATGGCTCCAGAGTACCTAGCACACGGTCAGTTAACAGAGAAAGCAGACGTATATAGCTTTGGGGTGTTACTGTTAGAAATAATTACTGGGAGACAGAATAACAGGAGCAAAGCATCAGAATATTCAGACAGCCTAGTAATAACGACATGGAAGCATTTTCAATCAGGGAGTGCAGAAGAATTAATTGATCCATATCTGTTGTTGGATGAGAAGCATAGAAGCAATGTTAAGAATGATATTTTAAGAGTGGTGCAGATAGGACTTCTATGCACCCAAGAAATGTGTTCCTTGCGACCATGTATGTCAAAGGCACTAAAGATGCTAACAAAGAAGGAGGAGCATGTGGAAGCACCTTCCAATCCACCCTTCATAGATGAAAGTACCATGGAACTCCATCACCAAAATGATGACCCATATTCTCCTTTCAACGTAGCAGATTCATTGGCTACTATTTCCCACAGCTCATTTTATCCGAGGTAA | 1956 | 0.4162 | MERTTPVVYFQCFIFLLMKTVLLSKTVIAEPRANTVNTTCGHKLEHNSTIFVPNFVATMEKISEQMRITGYGTAVVGTGGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNGGRIYLDGCFMRAENYSFFDEYTGPGDKAVCGNTTRKNTTFQAAAKKAIMTAVQAAPNNKGYARTEVAVAGTANDSAYVLANCWRSLDAKSCKACLENASTSILGCLPWSGGRALNTGCFMRYSDTDFLNKEEENGSSGDNVLVIVIAVVSSTIVLVVGVSLLLYIRKHRYVQMKRRGSNDAEKLAKSLHRNSLNFKYSTLEKATNSFDEANKLGQGGFGAVYRGVLPDGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESFLIYEFLPNRSLDRFIFDQNKGRELNWDKRYDIIIGTAEGLVYLHENSNIRIIHRDIKASNILLDAKLRAKIADFGLARSFEDDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIITGRQNNRSKASEYSDSLVITTWKHFQSGSAEELIDPYLLLDEKHRSNVKNDILRVVQIGLLCTQEMCSLRPCMSKALKMLTKKEEHVEAPSNPPFIDESTMELHHQNDDPYSPFNVADSLATISHSSFYPR | 651 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian1g02407 | 651 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 33 | 135 | - | - | |
Vian1g02407 | 651 | SMART | serkin_6 | 325 | 576 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian1g02407 | 651 | ProSitePatterns | Protein kinases ATP-binding region signature. | 331 | 353 | IPR017441 | GO:0005524 | |
Vian1g02407 | 651 | Pfam | Salt stress response/antifungal | 49 | 133 | IPR002902 | - | |
Vian1g02407 | 651 | Pfam | Salt stress response/antifungal | 148 | 242 | IPR002902 | - | |
Vian1g02407 | 651 | CDD | STKc_IRAK | 331 | 602 | - | - | |
Vian1g02407 | 651 | Gene3D | - | 32 | 135 | IPR038408 | - | |
Vian1g02407 | 651 | Gene3D | - | 145 | 245 | IPR038408 | - | |
Vian1g02407 | 651 | FunFam | Putative DUF26-domain receptor-like protein kinase family protein | 288 | 400 | - | - | |
Vian1g02407 | 651 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 446 | 458 | IPR008271 | GO:0004672|GO:0006468 | |
Vian1g02407 | 651 | ProSiteProfiles | Protein kinase domain profile. | 325 | 580 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian1g02407 | 651 | FunFam | Cysteine-rich receptor-like protein kinase 3 | 144 | 245 | - | - | |
Vian1g02407 | 651 | Pfam | Protein tyrosine and serine/threonine kinase | 328 | 525 | IPR001245 | GO:0004672|GO:0006468 | |
Vian1g02407 | 651 | ProSiteProfiles | Gnk2-homologous domain profile. | 140 | 245 | IPR002902 | - | |
Vian1g02407 | 651 | Gene3D | Transferase(Phosphotransferase) domain 1 | 401 | 612 | - | - | |
Vian1g02407 | 651 | ProSiteProfiles | Gnk2-homologous domain profile. | 33 | 135 | IPR002902 | - | |
Vian1g02407 | 651 | Gene3D | Phosphorylase Kinase; domain 1 | 285 | 400 | - | - | |
Vian1g02407 | 651 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 85 | 628 | - | - | |
Vian1g02407 | 651 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 401 | 608 | - | - | |
Vian1g02407 | 651 | SUPERFAMILY | Protein kinase-like (PK-like) | 307 | 602 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian1g02407 | Vian-Chr1 | 32799467 | 32802203 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian1g02407 | 8 | 651 | Receptor kinase-like Gene Family | AT1G70520 | 65.635 | 0.0 | 852 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vian1g02407 | PK_Tyr_Ser-Thr | 8.5e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian1g02407 | - | - | gmx:100818343 | 1128.62 |