Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02355 ATGTCCTCGGAGAAGGAGAGAGAGACCCAAGTTTACATCGCCAAGCTCTCTGAGCAAGCTGAGAGATATGAAGATTCATCAGAAATGGTTGAATGCATGAAGGCGATTGCAAAACTTGATCTAGAATTGACCGTGGAAGAGAGGAATCTGCTGTCGGTGGGATATAAGAATGTGATTGGTGCACGAAGAGCTTCTTGGCGCATTATGTCATCGATTGAACAGAAGGAAGAGTCTAAAGGAAATGAGAGCAATGCAAAAATGATAAAGAATTATCGTCAGAAAGTGGAAGAGGAACTCTCCAAAATTTGCAGTGATATTCTTTCAATTATTGACAAGCATCTTGTTCCTTCTTCCACCTCTGGAGAAGCCACCGTTTTCTACTATAAGATGAAGGGTGACTATTATCGATATCTAGCTGAGTTCAAGACCGATCAAGAAAGAAAGGAGGCAGCTGAGCAATCACTGAAGGGATATGAGGCTGCTTTAGCTGCAGCAAACACAGATCTTCCATCAACACATCCAATTCGTCTTGGACTTGCACTCAACTTCTCAGTCTTCTATTATGAGATAATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTAAGCAAGCTTTCGATGAAGCAATTGCTGAGTTAGACACCTTGAGTGAAGAGTCATACAAGGACAGCACCTTGATCATGCAGCTCTTGAGAGACAATCTCACTCTCTGGACCTCCGATTTGCCCGAGGATGGAGGTATCATCGTCACCATTTAA 756 0.4325 MSSEKERETQVYIAKLSEQAERYEDSSEMVECMKAIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNAKMIKNYRQKVEEELSKICSDILSIIDKHLVPSSTSGEATVFYYKMKGDYYRYLAEFKTDQERKEAAEQSLKGYEAALAAANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGIIVTI 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02355 251 SMART 1433_4 7 251 IPR023410 -
Vian1g02355 251 Coils Coil 13 33 - -
Vian1g02355 251 Coils Coil 198 218 - -
Vian1g02355 251 Coils Coil 148 168 - -
Vian1g02355 251 Pfam 14-3-3 protein 14 238 IPR023410 -
Vian1g02355 251 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Vian1g02355 251 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Vian1g02355 251 PANTHER 14-3-3 PROTEIN 7 240 IPR000308 -
Vian1g02355 251 PIRSF 14-3-3 1 247 IPR000308 -
Vian1g02355 251 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Vian1g02355 251 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Vian1g02355 251 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Vian1g02355 251 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Vian1g02355 251 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Vian1g02355 251 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Vian1g02355 251 SUPERFAMILY 14-3-3 protein 6 240 IPR036815 -
Vian1g02355 251 Gene3D - 1 247 IPR036815 -
Vian1g02355 251 FunFam 14-3-3 protein epsilon 1 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02355 Vian-Chr1 30575989 30578021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02355 3 246 14-3-3 family AT1G26480 87.295 7.12e-160 442