Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02328 ATGGGTTCAGGGAGCTCGGAAGTGAAGGTATTGGGGAAGTGGGCGAGCCCATTTAGCAACAGGGTTGAGCTCGCTCTGAAGCTGAAGGGAGTAACCTACGAATACTCCGAGGAAGATCTCGCCAACAAGAGCCATGACCTACTCAAATACAACCCTGTTCACAAGAAGGTTCCTGTTCTCGTCCACAACGGAAACCCTCTAGCTGAGTCGCTTCTTATTGTTGAATACATCGATGAGACTTGGAATAATAACCCCCTTTTGCCTCAACACCCTTACGAGAGAGCCTTGGCACGTTTCTGGGCTAAGACCTTAGATGACAAGATTTTGCCTGCAATATGGAATGCATGCTGGAGTGATGAGAAGGGGCGAGATAAAACAACGACGGAAGCCATGGAAGCTTTGGAGATCCTGCAGGAAGCACTGAAGGAGAAGAGGTTCTTTGGTGGAGAGAGCATAGGATTGGTAGATATTGCTGCCAATTTCATTGGATATTGGGTTGAAATATTGCAGGAAATTGCAGGGTTGAAATTGCTTACTCTTGAGAAATTTCCCAAGTTATATAAATGGAGCCAAGAGTTTGTGAATCACCCTGTCATCAATGAGGGCCTGCCTCCCAGAGATCAGTTGTTTGCTTTCTTCAAAGCTTCTTCAAAGAAATAG 660 0.4591 MGSGSSEVKVLGKWASPFSNRVELALKLKGVTYEYSEEDLANKSHDLLKYNPVHKKVPVLVHNGNPLAESLLIVEYIDETWNNNPLLPQHPYERALARFWAKTLDDKILPAIWNACWSDEKGRDKTTTEAMEALEILQEALKEKRFFGGESIGLVDIAANFIGYWVEILQEIAGLKLLTLEKFPKLYKWSQEFVNHPVINEGLPPRDQLFAFFKASSKK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02328 219 SUPERFAMILY GST C-terminal domain-like 79 216 IPR036282 -
Vian1g02328 219 CDD GST_N_Tau 8 81 - -
Vian1g02328 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Vian1g02328 219 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Vian1g02328 219 Pfam Glutathione S-transferase, C-terminal domain 100 197 IPR004046 -
Vian1g02328 219 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Vian1g02328 219 FunFam Glutathione S-transferase U10 2 86 - -
Vian1g02328 219 Gene3D - 87 219 - -
Vian1g02328 219 Gene3D Glutaredoxin 1 86 - -
Vian1g02328 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Vian1g02328 219 SFLD Main.3: Omega- and Tau-like 5 218 IPR045073 -
Vian1g02328 219 SFLD Main (cytGST) 5 218 - -
Vian1g02328 219 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Vian1g02328 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 209 IPR045073 -
Vian1g02328 219 FunFam Tau class glutathione S-transferase 87 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02328 Vian-Chr1 30000376 30001105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02328 8 215 Glutathione S-transferase Gene Family AT3G09270 58.095 1.50e-87 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02328 K00799 - gmx:100527381 390.193