Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02320 ATGGAAGGGAATGCGAAAAGCGAGCAAATCGTGGATGTAGGGGCGGTTGTCGAAGCTGTTTCAGCTGATGACGGTGATGCTCCTCTCTACAGCCTCGAAAGTCTTTGCATGCGATGTGGTGAAAACGGGATTACAAGATTTTTATTGACTTTAATTCCTCACTTCAGAAAGATTTTGTTATCAGCTTTTGAATGTCCACACTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGTGAAATTCAACCACGTGGTTGTCGTTACACTTTGGCAATCCCATCAGGCGAGCAGAAGATGCTAAATCGTCAAGTGGTTAAATCAGAATCTGCTACCATTAAGATACCTGAACTGGATTTTGAGATTCCACCAGAAGCTCAGCGTGGTAGTCTGTCAACGGTGGAAGGGATACTTATGAGAGCAGGTGATGAACTTCAGGCCCTTCAAGAGGAACGCAAAAAAGTGGCTTCAGAGACAGCTGACGCAATTGATCAGTTCTTGGTGAAACTGCGAGCCTGTGCAACAGGAGAATCAGCCATCACCTTTATTCTTGATGATCCTGCTGGAAATAGCTTCATCGATAACCCGTTTGCACCATCATCTGATCCATCACTGACGATCAAGTTTTATGAGAGAACTCCTGAGCAGCAAGCATCATTGGGATACCTTGTTGATTCCACACAGATTGAAGGAACTCGTGTTGACCCCCTGGAAGGGGGAGAAGCTGTGCCTACTGATCAAGTAAGGACAGAACCACATGGATCAATAGGGGCAACAGCTGGGCATCGAGCCATTGCTCAGAGTAACAGTGCAGAAATGGCTGAAGCCTTGTTTCGATATACGGCACCAGAAGAGGTGATGACTTTCCCATCTACTTGTGGTGCCTGTGCTGTCAAGTGTGAGACTCGAATGTTTGTCACCAATATTCCTTACTTTCAAGAAGTAATTGTTATGGCATCCACATGTGATGTCTGTGGCTACCGCAACTCTGAGTTGAAACCTGGTGGACGAATTCCTGAAAAGGGGAAAAAAATTACTCTTTCTGTTAAGAATGTCAATGACCTTAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCGGAAGTTGACTTGGAGCTGGCAAGCGGAACCCTTGGAGGAATAGTTACAACTGTTGAAGGTTTAATCACAAGAATTGGTGAAAGCCTTGAGAGGGTCCATGGCTTTACTTTTGGAGATAGTCTTGATGAAAATAGTAGAAGCAAGTGGATAGACTTTAAAACAAGACTAAACAAGCTTCTTAGCTTAGAAGAAGCTTGGACTCTAATTCTTGATGATGCATTAGCCAATTCTTTTATAGCACCTGCAACTGATGATCTGAAAGAGGACAAACAATTAACATTTGAGGAATACGAGAGGTCATGGGAACAAAATGAAGAATTAGGTCTGAATGATATGGACACCTCTTCTGCCGAAGTTGGTTCTGCACCAACCAATACTTCTAAAATTGAGTGA 1500 0.4347 MEGNAKSEQIVDVGAVVEAVSADDGDAPLYSLESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCRYTLAIPSGEQKMLNRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRAGDELQALQEERKKVASETADAIDQFLVKLRACATGESAITFILDDPAGNSFIDNPFAPSSDPSLTIKFYERTPEQQASLGYLVDSTQIEGTRVDPLEGGEAVPTDQVRTEPHGSIGATAGHRAIAQSNSAEMAEALFRYTAPEEVMTFPSTCGACAVKCETRMFVTNIPYFQEVIVMASTCDVCGYRNSELKPGGRIPEKGKKITLSVKNVNDLSRDVIKSDTASVKVPEVDLELASGTLGGIVTTVEGLITRIGESLERVHGFTFGDSLDENSRSKWIDFKTRLNKLLSLEEAWTLILDDALANSFIAPATDDLKEDKQLTFEEYERSWEQNEELGLNDMDTSSAEVGSAPTNTSKIE 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02320 499 PANTHER ZINC FINGER PROTEIN ZPR1 15 488 IPR040141 -
Vian1g02320 499 MobiDBLite consensus disorder prediction 234 255 - -
Vian1g02320 499 FunFam Zinc finger protein ZPR1 281 335 - -
Vian1g02320 499 FunFam Zinc finger protein ZPR1 24 79 - -
Vian1g02320 499 Gene3D ZPR1, A/B domain 336 478 IPR042451 -
Vian1g02320 499 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
Vian1g02320 499 FunFam Zinc finger protein ZPR1 336 478 - -
Vian1g02320 499 Coils Coil 130 164 - -
Vian1g02320 499 MobiDBLite consensus disorder prediction 467 499 - -
Vian1g02320 499 MobiDBLite consensus disorder prediction 476 499 - -
Vian1g02320 499 SMART zpr1 290 450 IPR004457 GO:0008270
Vian1g02320 499 SMART zpr1 34 194 IPR004457 GO:0008270
Vian1g02320 499 NCBIfam ZPR1 zinc finger domain 36 218 IPR004457 GO:0008270
Vian1g02320 499 NCBIfam ZPR1 zinc finger domain 291 482 IPR004457 GO:0008270
Vian1g02320 499 Gene3D ZPR1, zinc finger domain 26 79 IPR042452 -
Vian1g02320 499 Gene3D ZPR1, zinc finger domain 280 335 IPR042452 -
Vian1g02320 499 FunFam zinc finger protein ZPR1 80 221 - -
Vian1g02320 499 Pfam ZPR1 zinc-finger domain 290 448 IPR004457 GO:0008270
Vian1g02320 499 Pfam ZPR1 zinc-finger domain 34 192 IPR004457 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02320 6 498 C2H2 Transcription Factor Family AT5G22480 74.089 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02320 K06874 - gmx:100798741 870.537