Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02317 ATGGCGAGGTTGAGGGTGTTGTCTGAGCTTGACACAGCAAGGACGCAGTACTATCACTTCAAAGCCATCATCATTGCAGGGATGGGGCTCTTCACCGATGCCTATGACCTTTTCTCAATCACTCTCATCATCAAGATGATGGGAAGGATATATTACGACCACCGCAAGGGCTTTCAGACCCCGCCGCTGGTCACCTCCGCCCTCGTTGCTACCGCGCTTCTGGGCACCGCCGTCGGTCAGCTCCTCTTCGGAAGGCTCGGCGACCTCAAGGGGCGCCGCCGAGTCTACGGATTCTCCTTGCTGTTGATGGTCTTCAGCTCCTTGGCCTCCGCCTTCTCCATTTGCATAAGAAAAACCTGCGTTTTCGTCACTCTTGGCTTCTTCAGGTTTATGTTGGGGCTGGGGATTGGTGGGGACTACCCTCTGTCTTCAACGATAATGTCGGAGTTTGCGAACAAGAAGACACGAGGGTCGTTCATAGCGGCGGTGTTTTCGATGCAAGGGTTCGGCATATTGGCGAGCTCAACCGTGACGGTGGTGGTGTGTTCCATTTTTCGTGCGGCCTCGAAGTCGTCGGAGGCTGACGTTGCTTGGAGGTTGATACTGATGCTGGGTTGCGTTCCGGCAGCCATGACTTACTACTGGCGCATGATGATGCCCGAAACTGCCAGGTACACAGCGTTAGTGGAGCACAATGTGATGCAAGCAGCAAAGGACATGGAGAAAGTTCTTGATGTAAGACTGAGCATGATTGCAGAGGAATACCCTTTGCCACCAATCCCACATCCCTACCCTCTCTTTTCAAGGGAGTTCTTCCGCCGCCATGGTCGTGACCTCTTTGCATGTTCTTCAACATGGTTCCTCGTCGACATTGTCTTCTACAGCCAAGTTTTGTTCCAAAGTGAAATATACAAACGCTACCTCGACGAAAAGGGAAAAGTAGACATCTATAAGGAGGCTATTCACGTCGCTTGGATCCAAGCCGTTATCACAGTCTGTTCCACCATCCCCGGTTACTTCTTCTCTGTCTACTTCATTGACAGATGGGGAAGGGTCAAAATCCAAATGATGGGTTTTTTCTTCATGGCAGTCATCTTTTTCATCATTGGAATTCCCTATTACACTTTTTGGACTACTCCGGACCATGAAGAGAACAAATGGTTCATGGTTTTGTATGGCCTTGCTTTTTTCTTTGCCAACTTTGGCCCTAACACTACCACTTTCATAGTCCCGGCTGAGCTTTTTCCAGCCAGGTTTAGGTCAACTTGTCATGGCATTTCTGGGGCAGCCGGGAAGGTTGGGGCGATCATTGGGTCTGTGGGCTTTCTTTGGGCTTCTCATAAAAAGAGGGAGTATGGATACAGTAAGGGAATTGGGATGCAGGTTACCCTTATCATACTTGGAGGAGTGTGCTTATTGGGAATGGTGATCACGTACTTTTTCACTAGGGAAACCATGGGAAGGTCCTTGGAAGAGAATGAGGTTGATAGTCAGACCAATGAAGTTGAAGAACATAATAATCTTTGA 1527 0.4938 MARLRVLSELDTARTQYYHFKAIIIAGMGLFTDAYDLFSITLIIKMMGRIYYDHRKGFQTPPLVTSALVATALLGTAVGQLLFGRLGDLKGRRRVYGFSLLLMVFSSLASAFSICIRKTCVFVTLGFFRFMLGLGIGGDYPLSSTIMSEFANKKTRGSFIAAVFSMQGFGILASSTVTVVVCSIFRAASKSSEADVAWRLILMLGCVPAAMTYYWRMMMPETARYTALVEHNVMQAAKDMEKVLDVRLSMIAEEYPLPPIPHPYPLFSREFFRRHGRDLFACSSTWFLVDIVFYSQVLFQSEIYKRYLDEKGKVDIYKEAIHVAWIQAVITVCSTIPGYFFSVYFIDRWGRVKIQMMGFFFMAVIFFIIGIPYYTFWTTPDHEENKWFMVLYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAAGKVGAIIGSVGFLWASHKKREYGYSKGIGMQVTLIILGGVCLLGMVITYFFTRETMGRSLEENEVDSQTNEVEEHNNL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02317 508 SUPERFAMILY MFS general substrate transporter 9 494 IPR036259 -
Vian1g02317 508 ProSitePatterns Sugar transport proteins signature 2. 131 156 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vian1g02317 508 Pfam Sugar (and other) transporter 24 494 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vian1g02317 508 Gene3D MFS general substrate transporter like domains 18 508 IPR036259 -
Vian1g02317 508 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 486 IPR020846 GO:0022857
Vian1g02317 508 FunFam Inorganic phosphate transporter 1-6 18 507 - -
Vian1g02317 508 CDD MFS_PhT 23 485 - -
Vian1g02317 508 Coils Coil 488 508 - -
Vian1g02317 508 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02317 Vian-Chr1 29804972 29808775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02317 1 494 Inorganic Solute Cotransporters AT1G76430 62.016 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02317 K08176 - gmx:100797683 887.1