Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02300 ATGGAGCCCTGCATCTTCATCATACTCTCTCTCTGTTTCTGCGTCCTAATAAGACGCTTCTTCTTCTCCCGTCGCATCAAACCCACCACCCCTCCTGGCCCTTCACACATACCAATCATCTCAACCATCCTATGGCTCACAAAATCCTTTCAAATCGAACCAATTCTCCGAACCCTCCACGCCAAATACGGTCCCATTCTCACCCTCCACATTGCTACTACTCCCGTCGTCTTCGTACGCGACCGCTTTCTCGCCCACCAAGCCCTCGTCCAAAATGGTTCTCTTTTCTCCGATCGCCCCAAGGCCCTCGCCGTCGCCAAAATCATAACCACCCACCAACACAACATTAGCTCCGCCTCCTATGGCGCCACCTGGCGCACCCTCCGCCGCAACCTCACCTCCCAGATGCTCCACCACTCCCGCGTCAAGTCCTTCTCCGGGATCCGCACCTGGGTCCTCCACACCCTCCTCACGCACCTCAAATCCCAATCCCAATCCAACAATTCTGTCAGAGTCATCGACCACTTCCAATACTCCATGTTCTGCTTGCTCGTCTTTATGTGCTTTGGGGAACGACTCGACGATGGCAAAGTCAGAGACATCGAGCGCGTGCAGCGCCAGATGCTTCTGCGCTTTAGAAGCTTCGACATCCTCAATTTCTGGCCCAGAGTCACGCGCGTTTTGCTCTGCAAACACTGGGAAGAGTTGCTGAGGCTTCGGAAGGAGCAAGAGGATGTTCTGGTTCCGCTTATAAGATCCAGGAAGCAAAAGCAAAGCAAGGAGGAAGGTGTTGTTTCGTATGTTGATACTTTGTTGGATTTGCAGTTGCCTGAGGAGAAACGCAAGCTCAACGAAGAGGAACTTGTGACGCTGTGTAATGAGTTTTTAAACGCGGGCACGGATACGACTTCCACTGCGTTGCAGTGGATCATGGCAAATTTGGTGAAGTACCCGCACGTGCAAGAGAGGGTGGTGGATGAGATAAGGGAGGTATTGGGTGAGAGAGAAGAGAGGGAAGTGAAAGAGGAGGAGTTGCAGAAACTGCCTTATCTGAAAGCTGTGGTTTTGGAGGGTTTGAGGCGTCACCCACCGGGGCACTTTGTGCTGCCGCATTCAGTGACTGAGGACGTGGTTTTGAATGATTACTTGGTGCCTAAGAATACGACAGTGAACTTCATGGTGGCAGAGATGGGGTGGGATCCAAAGGTATGGGAGGATCCAATGGCGTTTAAGCCAGAGAGGTTTATGAATGATGAGTTTGATATTACTGGGAGTAAAGAGATCAAGATGATGCCATTTGGTGCAGGCAGGAGGATTTGCCCTGGCTATAATCTGGCGTTGCTTCATTTGGAATACTTTGTGGCCAATTTGGTTTCGAATTTTGAGTGGAAGGTTCCAGAGGGTGGGGATGTGGATTTGTCTGAGAAACAAGAGTTTACTGTGGTAATGAAAAATGCATTGAAAGTTCATCTTTCTCCAAGAATCTAG 1488 0.504 MEPCIFIILSLCFCVLIRRFFFSRRIKPTTPPGPSHIPIISTILWLTKSFQIEPILRTLHAKYGPILTLHIATTPVVFVRDRFLAHQALVQNGSLFSDRPKALAVAKIITTHQHNISSASYGATWRTLRRNLTSQMLHHSRVKSFSGIRTWVLHTLLTHLKSQSQSNNSVRVIDHFQYSMFCLLVFMCFGERLDDGKVRDIERVQRQMLLRFRSFDILNFWPRVTRVLLCKHWEELLRLRKEQEDVLVPLIRSRKQKQSKEEGVVSYVDTLLDLQLPEEKRKLNEEELVTLCNEFLNAGTDTTSTALQWIMANLVKYPHVQERVVDEIREVLGEREEREVKEEELQKLPYLKAVVLEGLRRHPPGHFVLPHSVTEDVVLNDYLVPKNTTVNFMVAEMGWDPKVWEDPMAFKPERFMNDEFDITGSKEIKMMPFGAGRRICPGYNLALLHLEYFVANLVSNFEWKVPEGGDVDLSEKQEFTVVMKNALKVHLSPRI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02300 495 SUPERFAMILY Cytochrome P450 31 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 485 - -
Vian1g02300 495 Pfam Cytochrome P450 31 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 Gene3D Cytochrome P450 23 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 CDD CYP77_89 62 488 - -
Vian1g02300 495 FunFam Cytochrome P450 family protein 24 495 - -
Vian1g02300 495 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02300 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02300 Vian-Chr1 29399883 29401370 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02300 1 494 Cytochrome P450 AT1G64940 56.863 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02300 K24184 - gmx:100805244 788.489