Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02297 ATGAAAGAAGGACCACTCATGGAAGGCTGGTTCATCATCCTAGTGTCTGCGTGCGTCTGCGTTATCGTAAGAGCCATATTCTCCCTTCAAACAAAAACCATCAACACCCCTCCAGGCCCTCTTCACATCCCAATCGTCACAAGCATCCAATGGCTCCTCAAATCCTTCAGCCAACTCGAGCCCATTCTCCGAAACCTCCACGCCAAGTTCGGCCCCATCGTCACCATCCGCATCGGATCTCAACGAGCCATATTCATCGCCGACCGCACCCTCGCCCACCAAGCCCTAGTCCAAAACGGTTCCCTCTTCTCCGACCGCCCCAAGGCTCTCGCCGCCTCCAAAATCCTCTCCAGCGACCAACGCAACATCAGCTCCGCCTCCTATGGCCCCACGTGGCGTATTCTCCGCCGAAACCTCACCTCCGAGGTGCTCCACCACTCACGCGTTAAGTCCTTCTCCGGGATCCGCAACTGGGTCCTCCAAGCCCTCCTCGTTCGCCTTAAATCTGATTCTCAATCCAACGATTCCATCAGAGTCATCGATCATTTCCAGTACTCCATGTTCTGCTTGCTCGTCTTCATGTGCTTCGGGGAGCGACTCGATGAGGGCAAAGTCAGAGACATCGAGCGCGTCCAACGGCAGTTACTTCTAGGGTTTACAAGGTTTAACATCCTTAATTTCTGGCCCAGAGTCACCCGCGTTTTGCTCCGCAAACGTTGGGAGGAGATGCTTAGGTTTCGCCAGGAGCAAGAGGACGTGATGATTCCACTTATAAGAGCCAGAAAGCAAAAGCAAGGCAAGGATGAAGGTGTTGTTTCGTATGTTGATACTTTGTTGGATTTGCAGTGGCCCGAGGAGAAACGCAAGCTCAACGAAGAAGAGATTGTGACGCTGTGTAATGAGTTTTTGAACGGGGGCACAGACACGACTTCCACGGCGTTGCAATGGATCATGGCGAATTTGGTGAAGAACCCGCAGGTGCAAGAGAGGTTGGTGGGTGAGATAAGGGAGGTAATGTGTGGGAGAGAAGACAGAGAAGTGAAAGAAGAAGACTTGCAAAAGTTTCCTTATCTGAAGGCAGTGATTTTGGAGGGTTTGAGGCGTCACCCACCTGGCCATTTTGTGTTGCCGCATGCAGTGACGGAGGACGTGGTTTTTAATGATTACTTGGTTCCTAAGAATGGGACAGTGAATTTCATGGTGGCAGAGATGGGGTGGGACCCTAAGGTATGGGAAGATCCAATGATGTTTAAGCCAGAGAGGTTTATGAATGATGAGGGGTTTGACATTACTGGAAGTAAAGAGATAAAGATGATGCCGTTTGGTGCTGGGAGGAGGATTTGCCCTGGCTATAATCTGGCTTTGCTTCATTTGGAGTACTTTGTGGCTAATCTGGTTTGGAATTTTGAATGGAAGGTTCCAGAGGGAGGAGATGTGGATTTGTCAGAGATACAAGAGTTCACTGTGGTAATGAAGAATCCATTGCAGGTTCATCTTTCTCCTAGGATCTAG 1512 0.5026 MKEGPLMEGWFIILVSACVCVIVRAIFSLQTKTINTPPGPLHIPIVTSIQWLLKSFSQLEPILRNLHAKFGPIVTIRIGSQRAIFIADRTLAHQALVQNGSLFSDRPKALAASKILSSDQRNISSASYGPTWRILRRNLTSEVLHHSRVKSFSGIRNWVLQALLVRLKSDSQSNDSIRVIDHFQYSMFCLLVFMCFGERLDEGKVRDIERVQRQLLLGFTRFNILNFWPRVTRVLLRKRWEEMLRFRQEQEDVMIPLIRARKQKQGKDEGVVSYVDTLLDLQWPEEKRKLNEEEIVTLCNEFLNGGTDTTSTALQWIMANLVKNPQVQERLVGEIREVMCGREDREVKEEDLQKFPYLKAVILEGLRRHPPGHFVLPHAVTEDVVFNDYLVPKNGTVNFMVAEMGWDPKVWEDPMMFKPERFMNDEGFDITGSKEIKMMPFGAGRRICPGYNLALLHLEYFVANLVWNFEWKVPEGGDVDLSEIQEFTVVMKNPLQVHLSPRI 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02297 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Vian1g02297 503 Gene3D Cytochrome P450 30 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 FunFam Cytochrome P450 family protein 30 503 - -
Vian1g02297 503 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 19 495 - -
Vian1g02297 503 CDD CYP77_89 69 496 - -
Vian1g02297 503 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 Pfam Cytochrome P450 37 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g02297 503 SUPERFAMILY Cytochrome P450 37 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02297 Vian-Chr1 29381217 29382728 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02297 7 502 Cytochrome P450 AT1G64940 57.143 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02297 K24184 - gmx:100788826 828.55