Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02279 ATGGAACGTAGCAATAGCACCATGCAGACGGATTTCGTTGAAGTAACATTAGAGGAAGGAACCTCGGGTTTCATCAAAGTACACAAAGTTGTTCCACCACCCTACAAGAGCAGCTTTCAGAAGTTCTTCGCCAAGGTCAAGGAAATCCTGTTCCCTGATGATCCTCTTCGCCAATTTAAGGGAGAACCTCTTCAGAGAAAACTAATCCTTGGTGCTCAATATTTATTCCCTTTGCTTCAATGGGTTCCTACTTACAACCTCAAACTCTTCAAATCTGACCTTATTTCTGGCCTCACAATTGCAAGTCTGGCCATCCCTCAGGGAATCAGCTACGCTAAGCTTGCAAATCTTCCTCCAATTTTTGGACTCTATTCTAGTTTTGTTCCTCCCCTTGTGTATGTTGTTCTTGGAAGCTCAATGGATCTTGCAGTAGGACCCGTTTCAATTGCTTCCCTAGTGCTAGGATCCATGCTGAATGAGGAAGTTTCTCCCACTGCAGAATCTGACCTCTTTCTTCAATTAGCCTTGACTTCAACATTCTTTGCCGGGATCTTTCAATCAGCCCTTGGAATTCTAAGGAAAATGTTATGTGCTATTTTTGCAGTGGTCGTGGCAAACAATAGTGATGGCGATTTGCTTCTTGGTGTTTCTGCTGGGTGCAAGACACGTGCTGGTGCTCCTCTTGTGTCTGTCATAATTTCTACTGCCCTGTCTTTTGCAATAAAGGCTCAACGTCATGGCATCAGTGTGATTGGAAAATTGCCAAGAGGAGTAAATCCTCCTTCAGCAGATAAGCTACTCTTTCGAGGAGATCATCTGCCTCTGGCCATCAAAACTGGCCTTATTACTGGCATTTTATCCCTCACAGAAGGAATTGCAGTGGGAAGAACATTTGCTACCATGAGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATAGGATTCATGAATGTGGTTGGCTCCACAACATCCTGCTATGTTACAACAGGATCTTTCTCTCGCTCAGCTATCAATCACAACGCAGGTGCTAGAACAGCAATGTCCAACGTAGTAATGTCTGTGACAGTCTTAGTGACACTGTTGTTTCTGATGCCTTTGTTCCAATACACGCCAAATGTTATATTGGGTGCAATCATAATATCAGCTGTAATTGGCCTCATTGATATTCCTTCTGCTTATCTCATTTGGAAGGTAGACAAATTCGATTTCGTTGTGATGTTGGCAGCCTTCTTTGGTGTCATTTTTATCTCTGTCCAAATCGGCCTAGCTGTTTCAGTAAGCTCATTGTTTCTGCAATTTCTCTACAGTTCTGCATTTTTAGAATTTAGACTGTTCAATGATAAAATCCAGATCAATCAGTATGTGATCTGTGGAAACTTTCGAATATATCGGTGGGTAGAAGAAGAACAAGATACGATCAAAGAAAACGTCTGCCTTCAATTTCTCATTCTTGACATGTCAGCTGTGAGTACCATAGACACAAGTGGAGTCTCACTTTTCAAGGACTTGAAAAACGCATTGACAATGAAGGGTGTTTCGATTGTGTTGGTGAATCCTCTGGCTGAGGTGATAGATAAGCTGCAAAAATCAGATGATGCTAATGACTTCATTCGAGCAGAATACCTTTTCTTAACAGTTGGAGAGGCTGTAGCTTCACTTTCATCAACAATGACGAGACAAACACCAACCGTGCAAGACGCAAGGTGGAATATACCATTGTGA 1728 0.4213 MERSNSTMQTDFVEVTLEEGTSGFIKVHKVVPPPYKSSFQKFFAKVKEILFPDDPLRQFKGEPLQRKLILGAQYLFPLLQWVPTYNLKLFKSDLISGLTIASLAIPQGISYAKLANLPPIFGLYSSFVPPLVYVVLGSSMDLAVGPVSIASLVLGSMLNEEVSPTAESDLFLQLALTSTFFAGIFQSALGILRKMLCAIFAVVVANNSDGDLLLGVSAGCKTRAGAPLVSVIISTALSFAIKAQRHGISVIGKLPRGVNPPSADKLLFRGDHLPLAIKTGLITGILSLTEGIAVGRTFATMRNYKVDGNKEMMAIGFMNVVGSTTSCYVTTGSFSRSAINHNAGARTAMSNVVMSVTVLVTLLFLMPLFQYTPNVILGAIIISAVIGLIDIPSAYLIWKVDKFDFVVMLAAFFGVIFISVQIGLAVSVSSLFLQFLYSSAFLEFRLFNDKIQINQYVICGNFRIYRWVEEEQDTIKENVCLQFLILDMSAVSTIDTSGVSLFKDLKNALTMKGVSIVLVNPLAEVIDKLQKSDDANDFIRAEYLFLTVGEAVASLSSTMTRQTPTVQDARWNIPL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02279 575 Pfam STAS domain 463 551 IPR002645 -
Vian1g02279 575 Gene3D STAS domain 455 561 IPR036513 -
Vian1g02279 575 ProSiteProfiles STAS domain profile. 463 555 IPR002645 -
Vian1g02279 575 Pfam Sulfate permease family 222 410 IPR011547 GO:0016020
Vian1g02279 575 Pfam Sulfate permease family 90 193 IPR011547 GO:0016020
Vian1g02279 575 CDD STAS_SulP_like_sulfate_transporter 472 548 - -
Vian1g02279 575 SUPERFAMILY SpoIIaa-like 478 555 IPR036513 -
Vian1g02279 575 PANTHER SULFATE TRANSPORTER 222 556 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02279 Vian-Chr1 28851017 28855603 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02279 224 556 Inorganic Solute Cotransporters AT1G23090 58.127 3.90e-138 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02279 K17471 - gmx:100779433 694.115