Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02271 ATGGCGGTTTTACCAAGTGCTTCCTCCACCTTGGAATTGACTATATCTGTCCCCGGCTTTGCTTCTTCACCAACTCTTCTGCCTTCATCATCTGCGTTTGGTATTGCAGTGAAAGAATTGGACATAAACCAAGTACCTGTAGAAGAAGATTGGATGGCATCAAACATGGAAGATGAAGAAGAAAGCAGCAATGGAGACCCTCCTCGCAAGAAACTCCGTCTCACAAAGGAACAATCTCGTCTCCTTGAAGAAAGCTTCAGACAAAACCACACCCTAAACCCAATAGACAGAACATTCCCCACTGAGTTGACTTGGGAAGCATTAAAGGCAAATGAAGCCAGTGTCGTCAACCATGCAATATATGTGATGCAATTAATGAATAAATATTTGAGCAAGCTGAAGCAGACAGAGATGGAGTGTGAGTACCTGAAGAGGTGGTTTGGGTCACTGACAGAGCAGAACAGAAGGCTTCAGAGGGAAGTGGAGGAACTGAGGGCCATGAAGGTGGGGCCACCCACCGTCATTTCCCCACACTCTTGTGAGCCGCTGCCAGCCTCCACATTAACCATGTGTCCCCGCTGTGAGCGCGTTACCACCACCGCCGACAAACTGCCTTCCGCCGCCGCCACTTTGTCCGCTAAAGTCCCACCGCACTCCCCTCAACCTTCTGCCGCCTGTTGA 681 0.4963 MAVLPSASSTLELTISVPGFASSPTLLPSSSAFGIAVKELDINQVPVEEDWMASNMEDEEESSNGDPPRKKLRLTKEQSRLLEESFRQNHTLNPIDRTFPTELTWEALKANEASVVNHAIYVMQLMNKYLSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLTMCPRCERVTTTADKLPSAAATLSAKVPPHSPQPSAAC 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02271 226 Coils Coil 147 167 - -
Vian1g02271 226 SMART halz 134 177 IPR003106 GO:0006355|GO:0043565
Vian1g02271 226 CDD homeodomain 68 97 IPR001356 GO:0003677
Vian1g02271 226 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 31 211 - -
Vian1g02271 226 Pfam Homeobox associated leucine zipper 134 168 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02271 Vian-Chr1 28657493 28660257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02271 37 208 Homeobox Transcription Factor Family AT1G70920 50.276 4.49e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02271 K09338 - gmx:100775341 325.479