Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02240 ATGATTTTACCTAAGCAATTTTCAGTTTCAACACTCCGCACCTTAACATTTTTTCTTTGCCTTCTCTTAGTAGGTTGCCAAATCCTTGAAACCCCATCACCACTATCGGATTCAATCCCACTAATCCCTGACATTTTAAACTTCATAGACCAAAGACTTGCTCTGGTCTTCCCCATTATTCAAGCCTTCAAGAACACAATAACCTCAGATCCTTTGGGAATAACAGCAACATGGGTTGGTCCAGATATATGCAACTACACAGGCTTCTACTGTGACAACCCACCAGATAACCTCACTGCCACAACCATTGCTTCAATTGATTTCAATGGTTTCCAACTCACTGCTCCAACACTTGATGGCTTCATCGATCAACTCCCTGACCTGGCTCTTTTCCATGCAAACAGTAACAAATTTTCTGGCACCATATCGCCAAAAATAGCGGGACTCAAGTTTCTATACGAACTTGATTTAAGTAACAACTTGTTCTCCGGGTTATTTCCCACGTCGGTCATCAACATCCCCACCTTATCCTTTTTGGACATTAGGTACAACTTTTTCACCGGCACGGTTCCCCCACAGATTTTCATGCAGACATTAGATGTTCTTTTCCTCAACAACAACAATTTCATGCTCACACTGCCCAACAATCTAGGAGACACACCCGTCGTTTATCTCACGTTGGCCAACAACAAATTCACCGGGCCCATTCCCCGGAGCATTAGAAAAGCCTCGTCCACGTTGATCGAAGTGCTGCTTTTGAACAACCTTTTAACTGGTTGTCTTCCCTACGACATCGGGTTCTTGGGAAACGTGACGTTGTTTGATGTTGGTGCGAACCTCTTAACTGGGCCAATACCTTGGTCCTTTGGGTGCTTGAAGAAAGTGGAGCAGCTGAACCTGGCAAGGAACCTTTTGTATGGACAGGTTCCGGAAGTGGTGTGTGCGTTGGGGAATTTGGCGAATCTTTCATTGTCTTACAATTATTTTACGAAAGTGGGACCTTTGTGCAAGAGGCTGATTCAAAGAGGGGTTCTGGATGTAAGGAAGAACTGTATTATTGGTCTTCCGGATCAGAGATCAGCGAAGGAATGCATGGCGTTTTTTTCGATTCCGAGGTCTTGTCCGAACCCTGCATCGTTTAATATCATACCGTGTCAAATTCATTGGACGAAACCGCAAGAGAGAACTAAGAGGCATTTGCTTTCATATTCTGCTATTTCCAGAAATAGAGTGCTTTTGTAA 1242 0.438 MILPKQFSVSTLRTLTFFLCLLLVGCQILETPSPLSDSIPLIPDILNFIDQRLALVFPIIQAFKNTITSDPLGITATWVGPDICNYTGFYCDNPPDNLTATTIASIDFNGFQLTAPTLDGFIDQLPDLALFHANSNKFSGTISPKIAGLKFLYELDLSNNLFSGLFPTSVINIPTLSFLDIRYNFFTGTVPPQIFMQTLDVLFLNNNNFMLTLPNNLGDTPVVYLTLANNKFTGPIPRSIRKASSTLIEVLLLNNLLTGCLPYDIGFLGNVTLFDVGANLLTGPIPWSFGCLKKVEQLNLARNLLYGQVPEVVCALGNLANLSLSYNYFTKVGPLCKRLIQRGVLDVRKNCIIGLPDQRSAKECMAFFSIPRSCPNPASFNIIPCQIHWTKPQERTKRHLLSYSAISRNRVLL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02240 413 Gene3D Ribonuclease Inhibitor 222 411 IPR032675 -
Vian1g02240 413 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vian1g02240 413 Gene3D Ribonuclease Inhibitor 59 219 IPR032675 -
Vian1g02240 413 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 39 387 - -
Vian1g02240 413 SUPERFAMILY L domain-like 63 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02240 Vian-Chr1 27962467 27963708 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02240 48 371 Leucine-rich Repeat extension Gene Families AT3G24480 48.457 3.48e-100 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02240 - - gmx:100813314 686.026