Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02184 ATGGAGAAGCAGAAAGGTGAGAAGGAAGGGTGTGAGAATGTGATGCTGTTACAAAAAAGTGTGAAGAAGCTTCACTTTGGAAGCTGGGAAGAGAAAGACGTGGCAGCAAAGGAGATAGAAAGGTTGGCTAAAGAATATGAGAAGGTGAGGGAATTGGCGACTGAGCTTGGGGTGCTCAGGGTGTTGGTTTCCATGGCGCTTTCCGACGTCGCTAGCCGCCGCCGAGTAGCACTCAAGGCATTGATCCACCTATCCAATGGAAATCACAAGAACAAGGCTTTGATAGTGGAGGCAGGACTGTTGTGCAAACTGCCTAAGAAAATTGACCTTGAAGATGAATCAATAAGAGAGTTTGCAGATTTGCTCTCTTCGTTATCATCTCTTGGAAACATCCAATTTCCTCATTCTTCATTAGACTTTCTCCAATTTCTCATAGACATTCTAAAGTCATGCCCAAGCTTTGATACAAAAGAGTCGTGTTTGGTAGCCATGTGCAACATCTCAACCGTGCTAGAGAATGCAGGGCCTTTGATTTCTAATGGGGTTGTACCTATTCTCTTGGAACTGTGCTCAGAGAAAGGAACTTCAGAGAAAGCACTTACCATCCTTGGGAACTTGGGGGTGACTTTAATGGGAAAGAAAGCATTGGAGAACAGCTCAATTGTGCCAAAATGCTTGATTGAGATCTTATCTTGGGAAGATGAACCCAAATGCCAAGAGTTGTCAACTAATATTCTGATTATTCTGGCTCATAAAAATTCAACACAGAGAAGTAAAATGGTACAGTCAGGGATTGTTCCTGTACTTCTTCAAGTAGCTTTATTAGGGAGTTCTTCGGCTCAGAAAAGAGCACGGAAATTATTGCGATGGTTCAGGGATGAAAGCCAAATAGAAATGGGGCCACATTTAGGCCCACAGTCTTCAAGAATTGCATATGTAACACTTAAAAATCAAAGAGACACAGAAGAAGGGAGGAGAACGATGAAGAGTTTAGTGAGAGAAAGTCTGCATAGGAATATGGAAATAATAACTAAAAGAGTTAATGCAGGTGAGGATTCGTCTAATGGGCTTAAGTCCCTGGTTACCAGCACAAGCTCCAAAAGTTTGCCAAACTGA 1116 0.4247 MEKQKGEKEGCENVMLLQKSVKKLHFGSWEEKDVAAKEIERLAKEYEKVRELATELGVLRVLVSMALSDVASRRRVALKALIHLSNGNHKNKALIVEAGLLCKLPKKIDLEDESIREFADLLSSLSSLGNIQFPHSSLDFLQFLIDILKSCPSFDTKESCLVAMCNISTVLENAGPLISNGVVPILLELCSEKGTSEKALTILGNLGVTLMGKKALENSSIVPKCLIEILSWEDEPKCQELSTNILIILAHKNSTQRSKMVQSGIVPVLLQVALLGSSSAQKRARKLLRWFRDESQIEMGPHLGPQSSRIAYVTLKNQRDTEEGRRTMKSLVRESLHRNMEIITKRVNAGEDSSNGLKSLVTSTSSKSLPN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02184 371 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 370 - -
Vian1g02184 371 Coils Coil 32 56 - -
Vian1g02184 371 Gene3D - 15 290 IPR011989 -
Vian1g02184 371 SUPERFAMILY ARM repeat 21 281 IPR016024 -
Vian1g02184 371 MobiDBLite consensus disorder prediction 347 371 - -
Vian1g02184 371 MobiDBLite consensus disorder prediction 348 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02184 Vian-Chr1 26892672 26894281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02184 30 296 U-box Gene Family AT1G67530 27.007 1.56e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02184 - - var:108327871 669.463