Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02138 ATGTGGACGCTATTCGGTACTCATATTCAATCCGCTGTTATATTATACCTACCCTTCTTCTCCAGCCCAACTCAGTTTCTTCAGTATCGCCTTCTTTCTGCCATGGATTCCAGCAGCGAAGTAGCCCTCGATTTAACACCCTTTCTAAAAATCTACAAAGACGGTCGCGCCGAGAGAATTTCAGGCTGCGACGTCGTTCCGCCGGGCATCGATTCCGCAACAAATGTCCTATCCAATGACTTCGTAATCTCAAAAGACGACGACGTATCAGCCAGGATCTTCACTCCGAAACTAAGCGATCAAAGCCAAAAGCTCCCCCTCCTCGTCTACTTCCACGGTGGGGGGTTCTGCATAGAAACACCATACTCTCCACCTTACCATAAATTCCTCAACTCACTTGTTTCCAAGGCCCACATCGTTGCCGTCTCCGTTCACTACAGAAGAGCCCCTGAACACCCCGTTCCCATCGCTCACCAAGATTCCTGGTCTTCGCTCCAATGGGTGGCCTCCCATTGTAACGGAAACGGCCCTGTGGAGTGCCTCAATCGCTACGCTGATTTCGGGAATGTGTTCTTCGCTGGGGATAGTGCGGGAGCAAACATCGCACACCACATGGCTCTACGCGTCGGAATCCACGGCCTTCCGGGTATCAACCTCCAAGGGATTGTGCTGGTTCATCCTTATTTTTGGGGCGTGGAGCGAATCGGTTCTGAGGTCCAAAAGCTCGACCAAGTTCCCATGGTGGATAATTTGTGGAGTTTCACTTGCCCTGCCTCGACAGGATCCGACGACCCGTTGTTGAACCCGGCTAAGGATCCGAATCTGGGGAAGCTGGCCTCGAAAAGAGAGCTGATTTGTGTTGCTGAGACTGATTTGCTGAAGGATAGGGGTTGGTATTACAAGGAGTTGCTGGAGAAGATTGAGTGGCAAGGTGTTGCTGAGGTGATGGAGGCAAAAGGAGAAGGTCACGTCTTTCATTTGTTCGATCCAGATTGTGACAGCGCTGTCTCCTTGCTCCAACGAATTGCTTCCTTCATTAACAACAGTTAA 1050 0.5067 MWTLFGTHIQSAVILYLPFFSSPTQFLQYRLLSAMDSSSEVALDLTPFLKIYKDGRAERISGCDVVPPGIDSATNVLSNDFVISKDDDVSARIFTPKLSDQSQKLPLLVYFHGGGFCIETPYSPPYHKFLNSLVSKAHIVAVSVHYRRAPEHPVPIAHQDSWSSLQWVASHCNGNGPVECLNRYADFGNVFFAGDSAGANIAHHMALRVGIHGLPGINLQGIVLVHPYFWGVERIGSEVQKLDQVPMVDNLWSFTCPASTGSDDPLLNPAKDPNLGKLASKRELICVAETDLLKDRGWYYKELLEKIEWQGVAEVMEAKGEGHVFHLFDPDCDSAVSLLQRIASFINNS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02138 349 Gene3D alpha/beta hydrolase 56 349 IPR029058 -
Vian1g02138 349 Pfam alpha/beta hydrolase fold 108 326 IPR013094 GO:0016787
Vian1g02138 349 PANTHER ARYLACETAMIDE DEACETYLASE 46 330 - -
Vian1g02138 349 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 190 202 IPR033140 -
Vian1g02138 349 SUPERFAMILY alpha/beta-Hydrolases 73 348 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02138 Vian-Chr1 26083714 26084763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02138 39 347 Carbohydrate Esterase AT3G48700 46.605 2.71e-94 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02138 - - gmx:100801816 499.975