Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02135 ATGGAACCAAGCATCAAGCCCGGCGAGGTTGTCCGCGAGTTTCCTCACCTCTTCCGCGCCTACAAAGACGGCAGCGTCGAGCGTCTCCTCGGCACCGAAACCACTCCTGCCGGAACAGACCCCACCACCGCCGTTGAATCCAAAGACGTCACCATAAACCCCCAAACCAACGTCGCCGTCCGCCTCTACCTCCCTTCCAACGCCTCCTCCTCCTCCGAGAAACTCCCTATTCTCGTCTACATCCACGGCGGCGCCTTCTGCGTCTGCACCCCCTTCAACCCCGCCTACCACAACCACCTTAACACAGTCTGCGCGGGCGCCAGCGTTATCGTGGCCTCCGTTCACTACCGCCTCGCCCCGGAGCACCCGCTTCCCGCCGGCTACAACGACACCTGGGAGGCCTTCCTGTGGGTCGCCTCCCACGCTGCCGGTTCCGGCCCGGAGCCCTGGCTCAACGCCCACGGCGATCCAAAAAACGTGTTCATAGCCGGTGACAGCGCCGGCGGTAACATCGCGCACAACGTGGCGATGCGAGGCAGTGCTGAGGGGTTCGCGGGATTGAACCTCCAGGGGATGGTGCTGCTCCACCCATTCTTCGGGAACGATAAAAAGGATGAGCTGGTAGAGTATCTGTACCCTACGTACGAAGGACCGAGCAACATGATGATCCACGCCCCGCTGGATCCGAAACTATCGGATCTGGCGTGTCCGAGGTTGCTGATCTTCGTGTCAGAGAAAGATTTTCTGAGGGACAGAGGGATAAGCTATTACGAGGCGCTGAAGAAAAGCGGGTGGAAGGGTGAGGTGGAGAAGGTGGAGTTCCCCGGAGAAGACCATGTGTTTCATCTTCTTCAGCCCTCTAAGCAAAATTCCTTGGATCTCGTTAAACAGTTTGTCGCATTCTTGAAGCAAACCGCCTCGAGCCGCTGA 930 0.5903 MEPSIKPGEVVREFPHLFRAYKDGSVERLLGTETTPAGTDPTTAVESKDVTINPQTNVAVRLYLPSNASSSSEKLPILVYIHGGAFCVCTPFNPAYHNHLNTVCAGASVIVASVHYRLAPEHPLPAGYNDTWEAFLWVASHAAGSGPEPWLNAHGDPKNVFIAGDSAGGNIAHNVAMRGSAEGFAGLNLQGMVLLHPFFGNDKKDELVEYLYPTYEGPSNMMIHAPLDPKLSDLACPRLLIFVSEKDFLRDRGISYYEALKKSGWKGEVEKVEFPGEDHVFHLLQPSKQNSLDLVKQFVAFLKQTASSR 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02135 309 Pfam alpha/beta hydrolase fold 78 282 IPR013094 GO:0016787
Vian1g02135 309 Gene3D alpha/beta hydrolase 17 308 IPR029058 -
Vian1g02135 309 SUPERFAMILY alpha/beta-Hydrolases 20 304 IPR029058 -
Vian1g02135 309 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 160 172 IPR033140 -
Vian1g02135 309 PANTHER ARYLACETAMIDE DEACETYLASE 13 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02135 Vian-Chr1 26041830 26042759 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02135 9 302 Carbohydrate Esterase AT1G49660 42.357 4.11e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02135 - - gmx:100800199 442.965