Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02124 ATGGGGAACCCGAAGAAAGAGGTTGCATGCGACGACGACGTATTGGCGTCGCCGAGGGATGTATTTGGGGTTCCCGTTTCGGGGACGGATTCGGACAGCACGGGGAGCAGCAACTACAATGGGCTTGGATCGCCCGGAGTGGTCTCAAATCGGTGCCTGAGAGACCCGCAGAACCAGCAATGGAAGACGATGATCGACGTGTTGAGGTTCAAGTCCGTTAGAAGATTCTCGACTATTCCTCTGCTTGGGGCGAGTTACGAGATCTCGCGCCGGAGCCTGAGGAACAAGTTGGCCCGTATTCGACCTGCCAATGACGACGATGATTTGGATTCTTGTATTGACATTGACGGCATTGCCACCAAGCCTTCTTGGAGAAACTTCAATTACGCTGACCTCGTCGCTGCAACCGACGATTTCAACCCTGAGAACATGATCGGAAAAGGTGGTCATGCTGAAGTCTACAAAGGATGCTTACCTGATGGTCGAGTTGTAGCAGTTAAAAGGCTAATGAGGAATGAAAAGGACATCGAGGATACAGTTGGTGATTTCTTGTCAGAGCTTGGAATCATTGCTCACATTAACCACCCAAATGCAACACGCTTGATAGGGTTTGGGATCGACCAAGGTCTCTATTTTGTTCTACAATTGGCCCCACATGGAAGCCTTGCCTCTCTGCTCTTTGGTGCAGCTCCCACTTCTCATTTCATCTCTTCTATTTTCAAGCATAGACAGACTCCCTATATGAATAGTGTTAAGGTTACATGGCTAATAAAAATGACACGTAATATTTCAGGACCTCAATGTCTGGAATGGACTGTAAGGTTTAAAGTAGCTGTTGCGGTTGCAAAAGGATTACAGTATCTCCACCACGATTGCCCGAGAAGAATCATTCACAGAGACATCAAAGCCTCAAATATATTACTCAACGACAATAATGAAGCTGAGATATCAGACTTTGGATTGGCAAAGTGGCTCCCAGATAAATGGGCTCACCATGTTGTCTTCCCAATAGAAGGCACATTTGGGTATTTAGCTCCGGAGTACTTTATGCATGGAATAGTTGATGAGAAGACTGATGTTTTTGCATTTGGGGTTTTGTTACTCGAGCTTATAACAGGGCGTCGAGCAGTTGATTCCAATAGCAGGGAAAGTCTTGTGATCTGGGCCAAACCACTTCTGGATGCAAAGCTGGTCCAAGAATTGGTAGACCCCAGATTGGGAGCTAATTATGATCTGGCCGAAATGAAGTATTGCATGGAAACGGCTTCCTTGTGCATCCATCACATGTCCTCTAAGCGGCCATACATGGATCTGTGTGTATTAGGGTGCACGCGTGTGGTGAAGATGACAATGCCAGAAGCTCGGGTCCTTGTTGAGGCATGGGAAAATATCTTAGGTTGTAAGTTGGCATGA 1413 0.4685 MGNPKKEVACDDDVLASPRDVFGVPVSGTDSDSTGSSNYNGLGSPGVVSNRCLRDPQNQQWKTMIDVLRFKSVRRFSTIPLLGASYEISRRSLRNKLARIRPANDDDDLDSCIDIDGIATKPSWRNFNYADLVAATDDFNPENMIGKGGHAEVYKGCLPDGRVVAVKRLMRNEKDIEDTVGDFLSELGIIAHINHPNATRLIGFGIDQGLYFVLQLAPHGSLASLLFGAAPTSHFISSIFKHRQTPYMNSVKVTWLIKMTRNISGPQCLEWTVRFKVAVAVAKGLQYLHHDCPRRIIHRDIKASNILLNDNNEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPLLDAKLVQELVDPRLGANYDLAEMKYCMETASLCIHHMSSKRPYMDLCVLGCTRVVKMTMPEARVLVEAWENILGCKLA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02124 470 MobiDBLite consensus disorder prediction 27 41 - -
Vian1g02124 470 Pfam Protein tyrosine and serine/threonine kinase 142 382 IPR001245 GO:0004672|GO:0006468
Vian1g02124 470 ProSiteProfiles Protein kinase domain profile. 139 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g02124 470 PANTHER OS08G0249100 PROTEIN 266 438 IPR046958 -
Vian1g02124 470 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 114 216 - -
Vian1g02124 470 Gene3D Phosphorylase Kinase; domain 1 113 214 - -
Vian1g02124 470 SMART serkin_6 139 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g02124 470 MobiDBLite consensus disorder prediction 22 41 - -
Vian1g02124 470 ProSitePatterns Protein kinases ATP-binding region signature. 145 167 IPR017441 GO:0005524
Vian1g02124 470 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 259 453 - -
Vian1g02124 470 SUPERFAMILY Protein kinase-like (PK-like) 123 440 IPR011009 -
Vian1g02124 470 Gene3D Transferase(Phosphotransferase) domain 1 255 455 - -
Vian1g02124 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02124 Vian-Chr1 25913996 25916495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02124 127 436 Trihelix Transcription Factor Family AT1G68690 40.752 5.43e-65 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Vian1g02124 PK_Tyr_Ser-Thr 3.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02124 - - gmx:100794225 640.573