Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02112 ATGGCTGCAACACCAGGACTGGAGCATTCTAGGAAGGCTTTTGGATGGGCTGCTAGAGACAAATCTGGGTTTCTCTCCCCCTTCGACTTCACCAGAAGGGAAACAGGGGAGAAAGATGTGGCAATCAAAGTGTTATTCTGTGGTATATGCCACACTGACCTCCACAATATTAAGAGTGAATGGGGTCAGTCCTTTTATCCACTGGTACCCGGGCACGAGATTGCAGGTGAAGTGGTAGAGGTTGGAAGCAAGGTAGAGAAGTACAAAGTGGGAGATAGGGTGGGTGTGGGGTGCATGGTTAATTCCTGCAGGTCGTGCAAGAGCTGCGATGAAAATCTTGAGAATTACTGTTCAAAAATGGTTCTGACGTATGGAGGGAAGGATATTGATGGGAGCATCACACAAGGAGGCTACTCTGATCTGGTGGTTGTAGACGAACACTTTGTGATCAGCATTCCTGACGGTCTACCCCTTGAGGCTGCTGCACCTCTCTTATGTGCTGGGATCACAGTGTATAGCCCTCTCCGATATTTTGGAATTGGCAAACCAGGCCTACATGTGGGTGTGGTTGGTCTTGGTGGCGTTGGCCACATGGCAGTTAAGTTTGCCAAAGCTTTTGGGGCTAAGGTCACTGTAATCAGCACATCTCCAAACAAAAAGAAGGAAGCTATTGAGCATCTTGGAGCTGACACATTTTTGGTCAGTCGTAATCAAGAGGAGTTGGAGGCTGCAAAGGGCACCCTGGATGGTATAATAGACACAGTGTCTGCAGTTCACTCTCTGGTCCCTCTGATTGATTTGTTGAAGACTGGTGGGAAACTTGTCATTGTTGGTCTGCCCGATCATCCTTTGGAGCTTCCAATCTTTCCTATACTAGCAAGAAAGAGTGTAGCTGGCAGTTGCATTGGAGGAATAAAGGAGACTCAAGAGATGATTAATTATGCTGCCAAATACGATATACAGCCTGACATCGAGATTATTCCTGTAGATTATGTAAACACGGCAATGGAGCGTCTCCTCAAAGCAGATGTCAAATATCGATTTGTTATTGACATTGGGAACACACTGAAGCCCAGCTCTTAA 1083 0.4663 MAATPGLEHSRKAFGWAARDKSGFLSPFDFTRRETGEKDVAIKVLFCGICHTDLHNIKSEWGQSFYPLVPGHEIAGEVVEVGSKVEKYKVGDRVGVGCMVNSCRSCKSCDENLENYCSKMVLTYGGKDIDGSITQGGYSDLVVVDEHFVISIPDGLPLEAAAPLLCAGITVYSPLRYFGIGKPGLHVGVVGLGGVGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADTFLVSRNQEELEAAKGTLDGIIDTVSAVHSLVPLIDLLKTGGKLVIVGLPDHPLELPIFPILARKSVAGSCIGGIKETQEMINYAAKYDIQPDIEIIPVDYVNTAMERLLKADVKYRFVIDIGNTLKPSS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02112 360 FunFam Cinnamyl alcohol dehydrogenase 167 322 - -
Vian1g02112 360 Pfam Zinc-binding dehydrogenase 194 314 IPR013149 -
Vian1g02112 360 Gene3D - 16 352 - -
Vian1g02112 360 FunFam Uncharacterized protein 16 166 - -
Vian1g02112 360 SUPERFAMILY GroES-like 20 184 IPR011032 -
Vian1g02112 360 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Vian1g02112 360 SMART PKS_ER_names_mod 23 350 IPR020843 GO:0016491
Vian1g02112 360 PANTHER ALDEHYDE REDUCTASE 8 355 IPR047109 GO:0016616
Vian1g02112 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 320 IPR036291 -
Vian1g02112 360 CDD CAD1 14 351 IPR047109 GO:0016616
Vian1g02112 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Vian1g02112 360 FunFam Putative cinnamyl alcohol dehydrogenase 6 323 352 - -
Vian1g02112 360 Gene3D - 167 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02112 Vian-Chr1 25672181 25674311 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02112 10 359 Monolignol Biosynthesis Gene Families AT4G37990 68.091 1.72e-161 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02112 K23232 - gmx:100809071 529.25