Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02105 ATGGCCATCAACAACTCAAGAACTCAAACTCAAAACCTCGTGTCTCTTTTTACTATCATCATTTCCTTCCTCGGACTGACCCAAAACGTCAAGTCAGCTTCTTTTTCATTCCCCAGTTTTGGGTCCTACACAAACACCATTGCCCTCGAAGGTGATGCCTCTTTTTCAGAAGGGACCATAAAGCTTACACCTGTCACACAGAACAGCGCCGGCAGAGCGTCCTATGCTGCACCCGTGCACCTTTGGGATGCCAAAACTGGCAAGCTCGCACGCTTCAACACAAACTTCTCCTTTGTTGTGGCGCCAAACGGTCCTGGGCTCTTTGCAGACGGCATTGCCTTCTTCCTCGCTCCGTTCAACTCCATCATTCCACAAAATTCCAGTGGTGGATTCCTTGGACTTTTCAGTCCTGACACTGCCCTAAACGTGTACCAGAACCAAATAGTGGCTGTGGAATTTGACTCCTTCAGTGGGAACCCCTGGGATCCTCCCTCTGCACATGTAGGTATTGATGTTAACTCCATTTCTTCGGTGACAACGGAGGCATGGGAAACTGACATTGCTGGGAAAGTGCTTGTTGCATTCGCCAGTGTGAGCTATGATCCTGTGGAGAAAAGTTTAGACGTGCTTTTAACATACCCTGGAAGCAACGTGGCTGACACTAGTCTCTCGTTTGTGATTGATTTGAGGACTGTTCTGCCAGAATGGGTTAGGGTTGGATTCTCGGGAGCCACAGGACAATTGGTTGAAATACATAACATTCTTTCTTGGACCTTCACTTCCGGCTACTACTAG 795 0.4818 MAINNSRTQTQNLVSLFTIIISFLGLTQNVKSASFSFPSFGSYTNTIALEGDASFSEGTIKLTPVTQNSAGRASYAAPVHLWDAKTGKLARFNTNFSFVVAPNGPGLFADGIAFFLAPFNSIIPQNSSGGFLGLFSPDTALNVYQNQIVAVEFDSFSGNPWDPPSAHVGIDVNSISSVTTEAWETDIAGKVLVAFASVSYDPVEKSLDVLLTYPGSNVADTSLSFVIDLRTVLPEWVRVGFSGATGQLVEIHNILSWTFTSGYY 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02105 264 PIRSF Plant_L_lectin 5 263 IPR016363 GO:0030246
Vian1g02105 264 ProSitePatterns Legume lectins alpha-chain signature. 233 242 IPR000985 -
Vian1g02105 264 ProSiteProfiles DOMON domain profile. 207 264 IPR005018 -
Vian1g02105 264 Pfam Legume lectin domain 33 261 IPR001220 GO:0030246
Vian1g02105 264 ProSitePatterns Legume lectins beta-chain signature. 149 155 IPR019825 -
Vian1g02105 264 Gene3D - 30 263 - -
Vian1g02105 264 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 262 IPR013320 -
Vian1g02105 264 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 15 261 - -
Vian1g02105 264 CDD lectin_legume_LecRK_Arcelin_ConA 34 261 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02105 Vian-Chr1 25600039 25600833 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02105 19 261 Receptor kinase-like Gene Family AT5G10530 38.462 6.80e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02105 - - gmx:100779326 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02105 1 25600039 25600833 Vian10g01268 10 21247348 21256473 PCT