Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02084 ATGGGAGATGTGGCTAAGGACCTTGCAGCTGGAACTATTGGAGGGGCAGCACAGTTGATATGTGGACACCCCTTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTGTACCACTCCCCGGTCAGCTTCCCAAGTATTCAGGTGCATTTGATGCTGTCAAGCAGACAATAGCATCAGAAGGGCCAAGGGGTTTGTACAAAGGTATGGGTGTTCCTCTTGCTACAGTAGCAGCTTTCAATGCTGTCCTGTTTACAGTGAGGGGACAGATGGAAACATTAGTGAGGTCCAATCCTGGTGCTCCCCTCACAGTGAATCAGCAATTTGTCTGTGGAGCTGGAGCTGGAGTTGCTGTTTCCATTCTTGCATGCCCAACTGAATTGATCAAATGCAGGTTGCAAGCTCAAAGTGCGCTTGCAGGCTCTGAAACAGCTACTGTCGCTGTTAAGTATGGAGGGCCAATGGATGTGGCCAGGCATGTTCTATCAGAAGGGGGAATAAGAGGTCTTTTCAAGGGCCTGGTTCCCACAATGGCTCGAGAGATACCAGGAAATGCTATAATGTTTGGTGTATACGAAGCATTAAAGAGAAAGTTTGCAGGAGGAACTGATACTTCTGGTCTAAGTAGAGGTTCTCTGATTGTTGCTGGAGGCTTGGCTGGAGCTTCTTTCTGGTTCATTGTTTACCCAACTGATGTTATTAAGAGTGTGATTCAAGTAGATGATTACAGAAACCCAAAATTTTCTGGTTCATTTGATGCATTCAGAAAGATTCAAGCTTCAGAGGGCTTCAAAGGCTTGTATAAGGGTTTTGGTCCTGCTATGGCCCGAAGTATTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTCTGGCATGA 891 0.4669 MGDVAKDLAAGTIGGAAQLICGHPFDTIKVKLQSQPVPLPGQLPKYSGAFDAVKQTIASEGPRGLYKGMGVPLATVAAFNAVLFTVRGQMETLVRSNPGAPLTVNQQFVCGAGAGVAVSILACPTELIKCRLQAQSALAGSETATVAVKYGGPMDVARHVLSEGGIRGLFKGLVPTMAREIPGNAIMFGVYEALKRKFAGGTDTSGLSRGSLIVAGGLAGASFWFIVYPTDVIKSVIQVDDYRNPKFSGSFDAFRKIQASEGFKGLYKGFGPAMARSIPANAACFLAYEMTRSALA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02084 296 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Vian1g02084 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 207 294 IPR018108 -
Vian1g02084 296 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 295 - -
Vian1g02084 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 197 IPR018108 -
Vian1g02084 296 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Vian1g02084 296 Pfam Mitochondrial carrier protein 213 295 IPR018108 -
Vian1g02084 296 Pfam Mitochondrial carrier protein 102 199 IPR018108 -
Vian1g02084 296 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 295 - -
Vian1g02084 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Vian1g02084 296 SUPERFAMILY Mitochondrial carrier 3 289 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02084 Vian-Chr1 25275285 25276558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02084 22 295 Antiporters AT1G79900 32.857 2.41e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02084 K15109 - gmx:100791908 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02084 1 25275285 25276558 Vian1g02084 1 25275285 25276558 ECH