Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02075 ATGACCGAGGTAGTATCGTTTATTAGCTTCAAATTCCAGAGTTTGCTCATTTCTTCTCGCGCTGTGCTTCTTATTTCTCTTCGCGTCGCCGCTGTTCTCCCAAGGGCTGCCTCCACCAGCGTCGTCGCTTCGCTTCGTCCGTCGTCGCTGCCGTCCATTGCTTCTTCGGTTCTTCTTCTTCGTGTTGCTACCGTCCATTTCTTCTTCCTCCTCCACAAGCTTTCTTCTTCCTCCACAACACAAATAGATCTGCGCACAATGGGGCGAGATTATCTTCTCACGGAGAGACCCAACTTTGGGGCAGCACCACCAGCGGTCTCGCGCAAGCCAAAGACGGAGGCGCGGCGAAGGCGCAAGGGCGCAGTGGTCGTTCCTTTTCTTGCGGCGGGGCGCGGGAGGGAGGCTTCCTTCCTCTTCTCTGTTCCTATTTGTCTAGGTTTCTGCTTGTTCCCTGTTCAATTTCTTCTTTTTGTCAAACTTATGTTTCGGGAGAAGAAGGAATATCCGGGGGCGGAAGGGGTGGTGGCGGCAGAGCTGAGAGCTCCAGGAACAGAGGCTAGTGGAGAATCCTTCTTAACTCATTCCCTCTCACACCGCCTCAAAATCTCCCTCACCTTCAATTCTCTCTCTTCTGTTCTTCACAACAACACACTCTCTTCCACTTCCTCTAATTCACCTCACCACACTTCTCTTCTTCAAGACACTACCTTCAAGCTGGCGTTCCAAAACCAAGCCACCACTGTCCGAGAAATCAAGCCCAAGAACCGCAGAATCATGGTAACTCAATCTCCCACTTTCGCTCAACTTCTTCTTTCCTGCATATCCCCCTCCACTTTCTCACTGTTTTCTTCTTGTTCTGTCAAAATAATGCAATTAATCATTCTTCTGTTTTCTGGGTCTGATTCAAATTTTGATTCTTTTGAAAAGGGTTCTGGAGGCCCTGATGACGAGGACAACCGGTGGCCGCCGTGGCTGAAGCCTCTTCTCAAAGAGAGCTTCTTTGTTCAATGCAAGCTGCACGCTGATTCGCACAAGAGCGAGTGCAACATGTACTGTTTGGATTGTATGAACGGCGCACTCTGCTCCCTCTGCCTCGCTTACCACAAAGATCACCATTCCTTCTTTTTCTGGAACTTAGTTAAAAAGTCCCATCTTTTCCCCTTCTCTATAAGAAGGTCCTCATACCATGATGTGATTAGGGTGAACGAGATTCAGAAGGTGTTGGACATTACAGGGGTCCAAACCTACATTATCAACAGCGCAAGGGTTGTTTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGTAAAGGAGTCACCAACACTTGTGAAGTCTGTGAGCGTAGCCTTCTTGATTCATACCGTTTCTGTTCTCTTGGTTGCAAGATTGTGGGGACTTCAAGGAACTTCGAGAAGAAGAAAAAGTCAGCAACAATGGCATCAGATTCAGAGGATTCATACAGCAGCAACAGCAGCCATGGAAAGAACAACAGCAACAAGGTGCAGAGTTTCACACCGTCCACGCCACCACCGACTTCGGTTAATTACAGAACAGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGAGGACTAGTGATAGAATACTAG 1614 0.4876 MTEVVSFISFKFQSLLISSRAVLLISLRVAAVLPRAASTSVVASLRPSSLPSIASSVLLLRVATVHFFFLLHKLSSSSTTQIDLRTMGRDYLLTERPNFGAAPPAVSRKPKTEARRRRKGAVVVPFLAAGRGREASFLFSVPICLGFCLFPVQFLLFVKLMFREKKEYPGAEGVVAAELRAPGTEASGESFLTHSLSHRLKISLTFNSLSSVLHNNTLSSTSSNSPHHTSLLQDTTFKLAFQNQATTVREIKPKNRRIMVTQSPTFAQLLLSCISPSTFSLFSSCSVKIMQLIILLFSGSDSNFDSFEKGSGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHHSFFFWNLVKKSHLFPFSIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSRNFEKKKKSATMASDSEDSYSSNSSHGKNNSNKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIEY 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02075 537 CDD Bbox2 337 372 - -
Vian1g02075 537 MobiDBLite consensus disorder prediction 471 537 - -
Vian1g02075 537 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 315 530 - -
Vian1g02075 537 Pfam PLATZ transcription factor 391 462 IPR006734 -
Vian1g02075 537 MobiDBLite consensus disorder prediction 480 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02075 Vian-Chr1 25074788 25081124 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vian1g02075 PLATZ 2.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02075 - - vra:106774881 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02075 1 25074788 25081124 Vian1g02075 1 25074788 25081124 ECH
Vian10g01111 10 13421837 13423517 Vian1g02075 1 25074788 25081124 PCT