Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02026 ATGGCACCTCGTCTTGTAGTTATAATAACCGCCATCGTTTTTCTTCTCCTGGCGGAGGCGCTTCCTACCACGGCGGAGCAATGCAACGCTAGGGATGAAGGCTGTCGGGACAAGGCGGAGTCGTTGAAACTTAAGGTAATAGCCATATTCAGTATTCTTGTTACGAGCGTGATCGGAGTTTCGATTCCCCTGTTCTCCCGGTCTGTTCCCGCGCTGCGACCGGACCGCGACCTTTTCGTACTCGTGAAGGCTTTCGCTTCCGGCGTGATACTCGCCACAGGTTATATGCATGTGCTGCCGGACTCTTTTGAAGATCTCACTTCGGAGTGCCTGCCGGAACGTCCGTGGCGAAAGTTTCCGTTCACCACTTTCATCGCCATGTTATCCGCGGTTCTCACTCTCGTCGTTGATTCCTACTCCATCAGTTTCTTCAAGAAGAAGCTCGCTGCCACTACCGCTAACGCTAACGGTTCCGCTTCCCTTGAAGCCGGAGAGAGGAAGGAAGTGGAAGTATGCGGTCATGGTCATGGACATGATGTGCCTGCACATGCAGATAGAGATGCAAATATCGTGGATGCCGGACAGTTGTTGAGGTTTCGTGTTGTGGCTCAGGTGTTGGAGTTAGGGATTGTGGTGCACTCAGTAGTGATTGGTTTGTCAATGGGAGCTTCGATGAATCCATGCACGATTAGGCCTCTCATTGCTGCGATATGCTTCCATCAAATGTTTGAAGGAATGGGCTTAGGTGGTTCTATACTTCAGGCTGAATATGGAATGAAGGTGAAAGCTATAATGGTTTTCTTCTTCTCAACTACAACTCCATTGGGAATTGTATTGGGGATCGCATTGTCGAATGTTTACAGCGACACTAATTCAAAGTCGCTTATTGTAGAGGGGGTTCTGAATGCTATATCTGCAGGACTTTTGAACTATATGGCACTGGTTGAACTATTGGCTCCTGATTTTATGGGGTCTAAGATACAAGGCAGTACAAAGATAATGGCTCTAGCATTTGTGGCAGTTTTACTAGGTGCTGGCGGCATGTCAGTCATGGCAATATGGGCATAA 1068 0.485 MAPRLVVIITAIVFLLLAEALPTTAEQCNARDEGCRDKAESLKLKVIAIFSILVTSVIGVSIPLFSRSVPALRPDRDLFVLVKAFASGVILATGYMHVLPDSFEDLTSECLPERPWRKFPFTTFIAMLSAVLTLVVDSYSISFFKKKLAATTANANGSASLEAGERKEVEVCGHGHGHDVPAHADRDANIVDAGQLLRFRVVAQVLELGIVVHSVVIGLSMGASMNPCTIRPLIAAICFHQMFEGMGLGGSILQAEYGMKVKAIMVFFFSTTTPLGIVLGIALSNVYSDTNSKSLIVEGVLNAISAGLLNYMALVELLAPDFMGSKIQGSTKIMALAFVAVLLGAGGMSVMAIWA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02026 355 PANTHER ZINC/IRON TRANSPORTER 41 352 - -
Vian1g02026 355 Pfam ZIP Zinc transporter 43 352 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vian1g02026 355 NCBIfam ZIP zinc/iron transport family 28 355 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02026 Vian-Chr1 24305384 24307324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02026 13 355 Inorganic Solute Cotransporters AT1G31260 54.986 1.36e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02026 K14709 - gmx:100784872 484.182