Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02012 ATGGTCTTTGCCAAACTCCAGGGCGCCAAGAACAACCTTCGAATCTCTTCCTCCCTTCAGGATCTATCTTCCTACCGTAACATCGACCCCGAACATGGCCTTCTCCGAGACCCCATCAACGCAAGTTTCTCCAAGACCAAACCGCTTCAGCTCCCCAACCCGGGTCGCCGCAAATGCCTCGTCCCGATCGCGATCATTGCCTTCCTCCTCCTCATCCTTTTCCTTCTCTACCACTTCTACTCCCACCAAGCCTCCCCCAAATACTACGTCGTTCTCGACTGCGGCAGCACCGGGACACGTGTCTACGTCTACAAGGCCCAAGTCCAACAAGCGCACTCCACCAACTTCCCCATCGCCATCCAATCCCTAAAAGACGGCCTCCGGAAGAACCCCGCCAGTGGCCGCGCCTACGACCGGATGGAGACCGAACCGGGCCTTGATAAACTCGTCCACAACGTAACCGGTTTGAAAATCGCGCTCAAACCGCTTCTAAAATGGGCGCAGAAGCAGATTCCAGAAGCTTCCCACAGGTCCACTTCCTTGTTCCTCTACGCCACCGCCGGGGTCCGGAGACTCCCCTTCGATGACTCCAAGTGGCTGCTCGATAATGCGTGGAACGTGCTTAAAGGTTCGCCTTTTGTGTGTCGGAGGGCTTGGGTGAAGATCATTTCCGGCACTGAGGAAGCTTACTTTGGCTGGATTGCGCTTAATTATGACAGTGGCAATCTCGGGGTTGAGCCCCGTAAGGAAACCTACGGTGCTCTTGATTTGGGCGGTTCTTCTCTGCAGGTGACTTTTGAGGGTTATAATCAACAGCATTTCAATAGTGAGACTAGTTTGTATGTTAGGATTGGGTCTGTAAACCATCATTTGACTGCTTATTCTCTTGCTGGTTACGGCCTCAATGAGGCCTTTGATAAGTCTGTTGCGCGTGTTTTCAAGAAGTTTGGGTATAGTGTTGCGGATGCTGTGAAGGGGAATCTGGAGGTTAAGCATCCGTGCTTGCAGTCTGGATACAAGGAGCGCTACACGTGCTCGCATTGTGCTGCTTTGGAGAAAGGAGGGGAGAGTCCTAAGGTTGAGGGGAATGAGAATTTGTTAGGGAAGAAGGAAGGATTGAAGACCGCGGTGACTCTTGTTGGCGTGCCGAATTGGCAGGAGTGTAGCGCGCTGGCGAAGGTTGCTGTGAATTTGTCTGAATGGAGTGATGTTAGTCCTGGGCTGGATTGTGAGATTGAACCCTGTGCTCTTGGTGATAACTTGCCTCGCCCTACGGGACACTTTTATGTGATTTCTGGATTTTTTGTGGTGTATAGATTTTTCAACTTGAGTGCAGAGGCCACGCTTGAGGATGTGTTGGAGAAGGGTAGGGAATTCTGTGAGAAGAGATGGGATGTTGCAAAGAATAGTGTTGCTCCTCAGCCCTTTATTGAGCAGTACTGCTTTCGGGCACCGTATATTGCATCATTGCTTAGAGAGGGTTTGCACATTACTGATAAGAGTATAACTGTTGGTTCTGGAAGTATCACTTGGACACTTGGAGTGGCTTTGTTGGAAGCTGGGAAGGCGTATTCTGTTAGATTTGGCCTTCGTGGTTTAGGCTTGCTTCAGATGAAGATGAATATACCTTTTCTTGTTCCCATTTTGATACTTTCGTTTATTCTTCTGCTTTGTGCTTTATCGTGGGTTGTCAATTGGATGCCAAGATTTTTCCGGAGACAATATCTTCCATTTTTCAGGCATAACAGTGGGTCCAGTGCATCTGTCCTTAATATCCCATCTACATTTCGGTTTCGGCGGTGGAGTCCAATCAATTCTGATTCCTATAGGTTTTCAAACCCTCCTCATTCAAAGCCAACACTGATTTCTGTTCAATACAAAAAACAAGCAACCCTTGGACCACTGCTCGATGGCAGTTTTTTTGTCATGCCTGGTGTTTTTCTGGCACACCAAGTGCTCGCAGGCACCCTCTTCTGTGCACCTGCCTGCATTCACGTCTCTTGTCATGCAGGGGATAGAATAAAGACCCCACTCAGCCCAAGAGCCGCAGGTTCACAGGGTAGATCGTTTAGCCTGGGACAGGGTCTTGGTGATAACAGTGGCAACATCCAGCTGATGGAGTCTCCCTTTCATCCATCAGCTGGTAGTTTCTTGCATAGTTATTCTTCAAACAATTTAGGGCAGCTGCAGGTTGACAGCAGTAGTATAGGGGCATTCTGGTCATCCCACAGAAGTCAGATGCGCCTGCAAAGTAGGAGATCTCAATCTCGGGAAGACCTGCATTCTTCATTGGCTGAGACGCATATGGTGAAGGTTTAG 2319 0.4933 MVFAKLQGAKNNLRISSSLQDLSSYRNIDPEHGLLRDPINASFSKTKPLQLPNPGRRKCLVPIAIIAFLLLILFLLYHFYSHQASPKYYVVLDCGSTGTRVYVYKAQVQQAHSTNFPIAIQSLKDGLRKNPASGRAYDRMETEPGLDKLVHNVTGLKIALKPLLKWAQKQIPEASHRSTSLFLYATAGVRRLPFDDSKWLLDNAWNVLKGSPFVCRRAWVKIISGTEEAYFGWIALNYDSGNLGVEPRKETYGALDLGGSSLQVTFEGYNQQHFNSETSLYVRIGSVNHHLTAYSLAGYGLNEAFDKSVARVFKKFGYSVADAVKGNLEVKHPCLQSGYKERYTCSHCAALEKGGESPKVEGNENLLGKKEGLKTAVTLVGVPNWQECSALAKVAVNLSEWSDVSPGLDCEIEPCALGDNLPRPTGHFYVISGFFVVYRFFNLSAEATLEDVLEKGREFCEKRWDVAKNSVAPQPFIEQYCFRAPYIASLLREGLHITDKSITVGSGSITWTLGVALLEAGKAYSVRFGLRGLGLLQMKMNIPFLVPILILSFILLLCALSWVVNWMPRFFRRQYLPFFRHNSGSSASVLNIPSTFRFRRWSPINSDSYRFSNPPHSKPTLISVQYKKQATLGPLLDGSFFVMPGVFLAHQVLAGTLFCAPACIHVSCHAGDRIKTPLSPRAAGSQGRSFSLGQGLGDNSGNIQLMESPFHPSAGSFLHSYSSNNLGQLQVDSSSIGAFWSSHRSQMRLQSRRSQSREDLHSSLAETHMVKV 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02012 772 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 61 522 IPR000407 GO:0016787
Vian1g02012 772 Pfam GDA1/CD39 (nucleoside phosphatase) family 84 518 IPR000407 GO:0016787
Vian1g02012 772 MobiDBLite consensus disorder prediction 750 772 - -
Vian1g02012 772 Gene3D Exopolyphosphatase. Domain 2 225 506 - -
Vian1g02012 772 MobiDBLite consensus disorder prediction 751 772 - -
Vian1g02012 772 Gene3D - 76 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02012 Vian-Chr1 24132425 24137907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02012 8 772 Nodulin-like Gene Family AT4G19180 52.618 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02012 - - gmx:100809597 994.956