Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02011 ATGGCAGCAGTGTCAGGGGGTGAGATATGGAAGGCCCACACTGCCATGGCAATGGTGCAGTTATTCAACGGAGGCTATCACGTCATCACCAAAGTTGCCCTTAATGTTGGCGTCAACCAAATCGTCTTCTGCGTCTTCCGCGATATCATTGCCCTCGCTATTCTCGCTCCCCTAGCTTTTATCCGTGAAAAGCGTACAAGGCCACCGATAACTAAACGCCTTCTCATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCATCTTTTGTTTCTTATTGGCTTAAGCTATACTAATCCAACTTATGCTGCTGCGGTTCAGCCAGCCACTCCGGTCTTTACTTTTCTATTGGCTGTGATGATGGGTACAGAAAGAGTGAACTTGCTAAGATATGAAGGTTTGGCCAAGGTTGGAGGAACTTTCTCTTGTGTTTTAGGTGCTGTACTGATGGTTTTGTATCGTGGTCCGGCATTGATAGGATATTCAGAAACAGACTTTGTATCACACAGTGAAATAAGTGCCAAAGGTCAACCAGAGCCTTCTGGATGGTTAATTGGTGGTTTACTGGATCTCGGATTTGATCAATTTCATCTTGGAGTTTTGTGCTTCATAGGGAATTGCATGTGCATGGCTGCTTTTCTAACCATTCAGGCTCCACTATTAAAAAAGTATCCTGCAAACCTGTCTGTCACGGCATATTCATACTTCTTTGGAGCTGTTCTGATGGTAACTACATCATTCTTTGCAACTAACGAGTCAACTGACTGGAGATTGACACAGTCTGAAACGATTGCTGTTATTTATGCGGGATTTATCGCATCTGCCCTTAATTATGGACTGATTACATGGTGCAACAAGATCTTGGGGCCAGCCATGGTTGCTCTTTATAACCCACTTCAACCAGGAGCTTCTGCTCTCCTTTCCAGAATTTTTCTAGGAACTCCAATTTACATGGGAAGCGTCGTAGGGGGATCTATGATCATTATTGGTTTGTATGCGGTTACTTGGGCGTCTTACAGAGAAAGACACGCAGCTGCTGCAGTTATTTCTCATGATAAGAATTCTTATAGAATTAACATTTTTTCAGGCCCCTCCACCATGTCCCCTAAGCCTTCAGATTAA 1128 0.4362 MAAVSGGEIWKAHTAMAMVQLFNGGYHVITKVALNVGVNQIVFCVFRDIIALAILAPLAFIREKRTRPPITKRLLMSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAVQPATPVFTFLLAVMMGTERVNLLRYEGLAKVGGTFSCVLGAVLMVLYRGPALIGYSETDFVSHSEISAKGQPEPSGWLIGGLLDLGFDQFHLGVLCFIGNCMCMAAFLTIQAPLLKKYPANLSVTAYSYFFGAVLMVTTSFFATNESTDWRLTQSETIAVIYAGFIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGTPIYMGSVVGGSMIIIGLYAVTWASYRERHAAAAVISHDKNSYRINIFSGPSTMSPKPSD 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02011 375 PANTHER WAT1-RELATED PROTEIN 14 344 IPR030184 GO:0016020|GO:0022857
Vian1g02011 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 343 - -
Vian1g02011 375 Pfam EamA-like transporter family 17 136 IPR000620 GO:0016020
Vian1g02011 375 Pfam EamA-like transporter family 200 337 IPR000620 GO:0016020
Vian1g02011 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02011 Vian-Chr1 24121142 24127459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02011 1 271 Nodulin-like Gene Family AT3G45870 68.266 1.85e-125 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02011 - - gmx:100809051 693.73