Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01996 ATGGAGAGTGGAAGAATGATCCACTGGTTAAATCTTGTAGCCTGTGTACTGCTACTGCTTAAGGCAGAAGGATCTTTGGTTCCATTGACTTTGGTCGAAAATGCACTGTCGAAAGGAGCTGTTTGTTTGGATGGAAGTCCCCCAGCTTACCACTTTGATAAGGGAGCTGGAGAAGGGGTTAACAACTGGATTGTCCACATGGAGGGAGGAGGATGGTGCAAAGATGCCGACGATTGCCTTGGCCGTAAGGACACTCGCTTAGGTTCATCTAACCAAATGGTTGAGGATCTTTACTTTTCTGGAATTTTAGGCAACGAGCGAGAGTATAATCCTGATTTCTACAACTGGAATAGAGTCAAGATTAGGTACTGTGATGGGTCATCGTTCACTGGTGATGTGGAAGAAGTTGATCCAACAAACAAATTGTACTTCAGAGGAGCAAGGATTTTTTCAGCTGTAATGGATGATTTATTAGCAAAAGGAATGGACAAGGCTGAAAATGCTATTCTCTCCGGCTGTTCAGCTGGAGGATTGACTACCATATTACACTGTGACAATTTTAAATCTCTGTTACCTTCTGGAGCTAATGTAAAATGTGTTCCAGATGCTGGTTTTTTTATCAATGTAGAGGACATCTCAGGAACACGTTTCATTGAAGACTATTACAGTAAAGTTGTGTCGACACATGGCTCGACAAAGAATTTGCCCTCATCTTGCACTTCAAAACTCAGCCCAGGACTGTGCTTTTTCCCAGAATATGTGCTATCACATATCAGTACCCCAATCTTCATTGTAAATTCAGCCTATGACTCATGGCAGATTCGGAACATCTTGGCACCTGGCGCTGCTGATCCAAGTGACAGTTGGCATAGCTGCAAGCTTGATTTAAGCAAATGCTCACATGATCAACTAAGTATAGTGCAAGGCTTCAAGAAGGAATTCGAGAAGGCAGTGAGTGTGGTTGGAGACTCTTCATCTAGAGGAATGTTTATAGACTCTTGCTTTGATCACTGTCAAACAGAATCACAGGAAACATGGTTTAAAAGTGACTCACCACATCTTGCCAATACAACAATTGCAAAAGCAGTAGGGGACTGGTTTTATGGTCGAGGTTCTTTCGATCAAATAGATTGCAACTATCCTTGCAACCCCACTTGTCAGAACCTTGTTTCTGATCTAAAAGACCACCCTGGAATATAG 1200 0.425 MESGRMIHWLNLVACVLLLLKAEGSLVPLTLVENALSKGAVCLDGSPPAYHFDKGAGEGVNNWIVHMEGGGWCKDADDCLGRKDTRLGSSNQMVEDLYFSGILGNEREYNPDFYNWNRVKIRYCDGSSFTGDVEEVDPTNKLYFRGARIFSAVMDDLLAKGMDKAENAILSGCSAGGLTTILHCDNFKSLLPSGANVKCVPDAGFFINVEDISGTRFIEDYYSKVVSTHGSTKNLPSSCTSKLSPGLCFFPEYVLSHISTPIFIVNSAYDSWQIRNILAPGAADPSDSWHSCKLDLSKCSHDQLSIVQGFKKEFEKAVSVVGDSSSRGMFIDSCFDHCQTESQETWFKSDSPHLANTTIAKAVGDWFYGRGSFDQIDCNYPCNPTCQNLVSDLKDHPGI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01996 399 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
Vian1g01996 399 PANTHER NOTUM-RELATED 14 388 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01996 Vian-Chr1 23842870 23845976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01996 5 399 Carbohydrate Esterase AT4G19420 55.116 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01996 K19882 - gmx:100780707 688.337