Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01995 ATGGAGACGAGTAGAAAGGGCCAATGGTTAAGTGTTCTGATATGTGTGGTACTATTACTAAAGGCAGAAGGGGTTCCTGTGGGAATCACTTTTGTTGAAAATGCAGTGGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCACTTCCATAAGGGATCTGGAGCAGGGATTAACAACTGGATTGTTCACTTTGAGGGAGGAGGATGGTGCAACAACGTTACTTCTTGCCTTTCTCGTAGGGACACTCGATTAGGCTCGTCTAAAAAAATGGATACCCAACTTTCCTTTTCTGGATTTTTTAGTAACAGTAAAAAGTTCAATCCAGATTTCTACGATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTTGATCGAGCAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGCTGTTGTTGATGATTTACTAGCAAAAGGAATGAAAAATGCTCAAAATGCAATTATCTCTGGATGTTCTGCTGGAGGGTTGGCTGCAATTTTAAACTGTGATCGATTCAAATCACTACTACCTGGAACGACTAAAGTGAAATGCCTTGCAGATGCTGGTTATTTTATCAATGTAAAGGATGTCTCTGGCGCACAGCGCATTGAAGAGTTCTACAATCAAGTTGTCCAAACACATGGCTCAGCTAAGAATTTGCCTGCATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCACAAAATGTGGTATCACAAATCAGTACGCCAATCTTCTTCGTAAATGCAGCTTATGATTCATGGCAGATCAAAAACATTTTGGCACCAGGTGCTGCAGATCCCCATGGCACCTGGCGTGAATGCAAGCTTGATATAAAAAAATGCTCATCAAATCAACTCAGTGTAATGCAAGTATTCAGGACTGATTTCCTGAGGGCATTTGGTGCTGTTGGAAACTCTCCATCAAAAGGGCATTTCATAGATGGTTGCTATGCTCACTGCCAAACTGGAACACAAGAGACATGGTTGAGAAATGACTCTCCTGTGTTAGGCAGCACAACAATTGCGAAGGCAGTTGGAGACTGGTATTATGATCGAAAGCCATTTAAGCAGATAGATTGTGCCTACCCTTGCAACCCCACTTGCCACAATCGTATTTTTGATCAGAATGAGCGTCCAGACGTATAG 1200 0.4275 METSRKGQWLSVLICVVLLLKAEGVPVGITFVENAVAKGAVCLDGSPPAYHFHKGSGAGINNWIVHFEGGGWCNNVTSCLSRRDTRLGSSKKMDTQLSFSGFFSNSKKFNPDFYDWNRIKVRYCDGSSFTGDVEAVDRATNLHFRGARVFAAVVDDLLAKGMKNAQNAIISGCSAGGLAAILNCDRFKSLLPGTTKVKCLADAGYFINVKDVSGAQRIEEFYNQVVQTHGSAKNLPASCTSRLRPGLCFFPQNVVSQISTPIFFVNAAYDSWQIKNILAPGAADPHGTWRECKLDIKKCSSNQLSVMQVFRTDFLRAFGAVGNSPSKGHFIDGCYAHCQTGTQETWLRNDSPVLGSTTIAKAVGDWYYDRKPFKQIDCAYPCNPTCHNRIFDQNERPDV 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01995 399 PANTHER NOTUM-RELATED 13 388 IPR004963 GO:0016787
Vian1g01995 399 Pfam Pectinacetylesterase 21 372 IPR004963 GO:0016787
Vian1g01995 399 SUPERFAMILY alpha/beta-Hydrolases 137 272 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01995 Vian-Chr1 23824134 23827766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01995 8 399 Carbohydrate Esterase AT4G19420 59.953 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01995 K19882 - gmx:100781246 765.377