Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01925 ATGGGGTACCTTGCACCTGAACTCACACGAACGGGGAAACCCACCACCAATTCTGATGTTTACGCTTTTGGAGCATTGTTGTTGGAGGTGGTGTGCGGGAGGAAGCCCATTGAGGTGAAGGCATTGCCGGAGGAGTTGGTGCTGGTGGACTGGGTCTGGGAGCGGTGGCGCATGGGGGCGCCGCTGGCGGTGGTGGACCCCAGGTTGGGTGGGGCGTTTGATGAGGTGGAAGTTTTGGTAGTGATTAAAGTGGGGTTGTACTGTTCCGTGGAGGCACCAGAGAAGAGGCCCAGCATGAGGCAGGTGGTGAGGTATTTGGATAGGGAGGTGGCGCGGCCTCCACCGGTGGTTTACGGGAAAAGAGAAGATGGTGGTGGTGGCTACTACAAGGAAGCCGAAGAGGTGCTAGCTGGTAGCAAAGCCGAAGAGGTGCTAGCTGGTAGCAAAGCCGAAGAGGTGCTAGCTGATGACGACCCCATAACCATCGGAGAAGCTTTGGAAGCGGCGGCCATAGCGGCGGGGAATAAAGCGGTGGACCAAAACGACACAGCTGCTATCAGCGCGACAGAGATTAGGGCTTCCGGAGAGAAGAGCGTGAGGTCCGGCGGCGTTGGTGAAACGACGCAATGGGAACAAAGTTGTGCGAAGGAGATGTTGGCCATGGGAGGAGCTTCGCGTCTTTTGGTTCATGATGAAGATGATGATTTTTGGTTGTTGATGCGGATGCGCAATTATGGGTTAGTTTCTGTTTGCAGGTGA 759 0.5573 MGYLAPELTRTGKPTTNSDVYAFGALLLEVVCGRKPIEVKALPEELVLVDWVWERWRMGAPLAVVDPRLGGAFDEVEVLVVIKVGLYCSVEAPEKRPSMRQVVRYLDREVARPPPVVYGKREDGGGGYYKEAEEVLAGSKAEEVLAGSKAEEVLADDDPITIGEALEAAAIAAGNKAVDQNDTAAISATEIRASGEKSVRSGGVGETTQWEQSCAKEMLAMGGASRLLVHDEDDDFWLLMRMRNYGLVSVCR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01925 252 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
Vian1g01925 252 SUPERFAMILY Protein kinase-like (PK-like) 2 112 IPR011009 -
Vian1g01925 252 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g01925 252 Pfam Seed maturation protein 160 209 IPR007011 -
Vian1g01925 252 PANTHER - 1 115 - -
Vian1g01925 252 Pfam Protein tyrosine and serine/threonine kinase 3 104 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01925 Vian-Chr1 22907580 22911122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01925 1 113 Receptor kinase-like Gene Family AT3G55550 65.487 1.00e-45 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vian1g01925 PK_Tyr_Ser-Thr 3.4e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01925 - - vum:124822188 218.779