Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01916 ATGATATCTAGCGCCAAATGGAGGCGTCGTGGGCGTACAACTGCAAAACCACAGATCTCTGAGCTGGCTGAAGTTTCAGTTGGTGGATACGGGGTTTCTTTTGGTTCTGCTCATTGGTTCAGAGTTGCTTTTCCTACATTTTCTCAGAAACCTGTTGTTTGGTTTTCTCTTTGCTCTGATTTGCTTTTCCATCAATGGATTCTGAAGTTTTTGATATACGGGGTCCTTAGAAGACCAAGGAACTCATTGGTTATCTCTGTGAAAAAGCAGAAACTTGTTTGCGCCAAATCCTTTGACCATATGGGAGGCTTATTGCACATGTTTGAGTTCAATCAGGGTAGGATGGCCAAGAAAATTCATGCTCATAAGAACAATAACGATGGATCCCTCTCCCAAAATGGAAATCATCATCTGGATATTTCCTTGTCATGTTTTAAAGATATGAAAACATCTGGAAATGGCATGAAGCTGCAAGTAGAAACCTCTCAGGTCCACTGTGCAGAAGGAGAATTACAATACTCCTGTCAAGTAGAAGATGGGTGGTCAAAGAAAATTAGTCACTCAAATGTGGATTCAGCGAAAAAAGCGAACAAAGAGGGTTTTTCCAAACAATCAGGCGCCAGAAGTAATGCCCCTAGCCTTGTGGCAAGGTTGATGGGGATAGACACCATGCCTTTACCATTAGACACTAAATCTGTCGTTCCATTGGACGAAAGCACACATGAAAATATGGAGAGGAAGTTTTCAAAGAAGAAAATGAATGGAAAAGGTTGGTTTGGTAGGGGTTCTTCAAACTTGAATTCTTTTAGCCATATGGAATTTGATTCATTTTATCAGCACATCGATGATGATGATGAAGATGATGAAGGTGGACATAGTTTTGGAGAACCGGAGCCAAGGGAACATCCTCAAGAAGAGGAACTCCAAAAATTCAAGAAAGAATTTGAAGAGTATCAATCAACAAGGTTTAAGGAGTGGCCGAAGGCTGTTGACATCGGAAGTGGTTCTAGGAGAATGCTTTCGCTTTCTCAAGAGAACCTGAGCAAGGAGAGCATGCAACATATTTCGAGTTCAAAGACAGATAACCACTCATTTAAGAAAAAAGAATCCTTTCCATCAAGAAGTAAAACACAAAGTAGGGACTTTGAGGAGTCTTTAATGATGAAATCCAAAAGCAGATTATTAGATATATGCACTTCTCCCACTCAGATAGTTATCTTGAAGCCTGGTTCTGAAAGGATTTGCAATTGCAACCATGAAGAGAACTTCACAAGTTTACATAGGAGAAAAGGTATAGAAGATTTTCTTGAGGAAGTGAGAGAGCGCTTGAAGTGTGAACTCCAAGGGATTAGAGCCAGTGGAATCGAGACACCTTTCAATGATAAATCTGTTGCTAAAGAGGTCAGAGAAAGTATGACTAGAGATGCTGAACCTAATTTACTGCGCTCAGAATCAACAAGATCATACAAAAGTAAAATGCAGCTCAACGGACAAAGTTCCCCAGAATTTTTCAACATAGATACTAGGAGGTTCTTGTCAGAGAGGCTAAGAAATACTGTAAAAAATGAATTGCATTTGGACATTCCTGAAGTGGCTTGTTATTTAGAGAATGACAGAGTTAGACTAAAGCAAGATACTATAAAGGGTACAGATGACAAGAGCCAGTGGGGAGTTCTAAAAGAGAAAAAAGAATTACAAACATGTTCCAATAGACATAAATTAGATGACAACGTATTGCTCCACAAGGAGTTGTCACCTAGGAACCTTGAAAGATCCTTGTCTGCTCCTGCATCAGGAGCATTATTTGGAAGGCTTCTTTTGGAAGACCGCCACATTTTAACGGGTGCCCTTATCCAGAGGAAGCTTGAAGCGGTTGAAGCTAGGCCTGTGGGTGCTAAAAAACAGAAGAAAGATGGATTTAATATTAAAGAAAAACTTTCCAACTTTAAATATACTCTTGGTCTAAGAGGGAAGCTGTTTGGCAAAAGGATTAAGTCAAAAGTAGAATCACATGGCACCGAATATGGTGAAATTTTGAGAGATGCCAGGAGTGGACCAACTATTCTCATGAACTATGGTGACAGACATGAGAACTCCACCGAGGTACCTCCTAGTCCTGCATCTGTGAGCAGCTGTGCTGATGAAGAACATTGGAGACAGATTGGGTATTCAAGTTTAACATCAACTCCAGATGCATCTTCATTAGATGATATTTTTGTTCCCAAGGTTTTTAGAGATATCAGCTCTGGTTTGAACGACCTAAAGAGGCAACTCAGTGAGCTTGATTCCGATGGCTATGATGATTTCACTACAAAGCAGGAACCGATTGAGTCTTCATTAGTTGAATTGGATGATCCAGCAGAATCTTATGTAAGAGATCTGCTTGTTGCCTCTGGTTTGTACTTTGGTTCATGGGATAAATATATTGGCAACTCAGTTTTTGAAGAAGTGGAAGAATCTCATAGGAAATTGGTGAAGGAGGATGAAAGATCCAGAAAATATCATAACAAGAATAAGTTAGAGCACAAGGTTTTACTTGATTTGTTAAATGAGGCACTTTCTATTGTTCTTGGACCACCTTTGACATTGTCTAGATTCAGAAGGAAACTAAGCAAATCCTCCTTGCAGCCTCCACCATGTGGAAAGGAACTACTAAAGTTAGTATGGGACATTGTCCGTGTTTCTTTACATCCAACCTCTAACACATCTCTTTATTCTGTTGACAGTTTTTTGGCACAAGATCTAGGATCTATTTCCTGGTCTGGGCTAACAAACGATGAGATTGATACATTGGAAAGAGAGACTGCATGTACAATCGCCGATGATTTGGTTGAAGAATTCACAAAGGATATGCTCTTGTAG 2862 0.3987 MISSAKWRRRGRTTAKPQISELAEVSVGGYGVSFGSAHWFRVAFPTFSQKPVVWFSLCSDLLFHQWILKFLIYGVLRRPRNSLVISVKKQKLVCAKSFDHMGGLLHMFEFNQGRMAKKIHAHKNNNDGSLSQNGNHHLDISLSCFKDMKTSGNGMKLQVETSQVHCAEGELQYSCQVEDGWSKKISHSNVDSAKKANKEGFSKQSGARSNAPSLVARLMGIDTMPLPLDTKSVVPLDESTHENMERKFSKKKMNGKGWFGRGSSNLNSFSHMEFDSFYQHIDDDDEDDEGGHSFGEPEPREHPQEEELQKFKKEFEEYQSTRFKEWPKAVDIGSGSRRMLSLSQENLSKESMQHISSSKTDNHSFKKKESFPSRSKTQSRDFEESLMMKSKSRLLDICTSPTQIVILKPGSERICNCNHEENFTSLHRRKGIEDFLEEVRERLKCELQGIRASGIETPFNDKSVAKEVRESMTRDAEPNLLRSESTRSYKSKMQLNGQSSPEFFNIDTRRFLSERLRNTVKNELHLDIPEVACYLENDRVRLKQDTIKGTDDKSQWGVLKEKKELQTCSNRHKLDDNVLLHKELSPRNLERSLSAPASGALFGRLLLEDRHILTGALIQRKLEAVEARPVGAKKQKKDGFNIKEKLSNFKYTLGLRGKLFGKRIKSKVESHGTEYGEILRDARSGPTILMNYGDRHENSTEVPPSPASVSSCADEEHWRQIGYSSLTSTPDASSLDDIFVPKVFRDISSGLNDLKRQLSELDSDGYDDFTTKQEPIESSLVELDDPAESYVRDLLVASGLYFGSWDKYIGNSVFEEVEESHRKLVKEDERSRKYHNKNKLEHKVLLDLLNEALSIVLGPPLTLSRFRRKLSKSSLQPPPCGKELLKLVWDIVRVSLHPTSNTSLYSVDSFLAQDLGSISWSGLTNDEIDTLERETACTIADDLVEEFTKDMLL 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01916 953 MobiDBLite consensus disorder prediction 470 494 - -
Vian1g01916 953 Pfam DUF761-associated sequence motif 206 225 IPR032795 -
Vian1g01916 953 MobiDBLite consensus disorder prediction 345 359 - -
Vian1g01916 953 MobiDBLite consensus disorder prediction 360 382 - -
Vian1g01916 953 MobiDBLite consensus disorder prediction 345 382 - -
Vian1g01916 953 MobiDBLite consensus disorder prediction 189 209 - -
Vian1g01916 953 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 101 952 - -
Vian1g01916 953 MobiDBLite consensus disorder prediction 281 306 - -
Vian1g01916 953 Pfam Domain of unknown function (DUF4378) 789 946 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01916 Vian-Chr1 22730730 22736411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01916 194 951 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 36.443 1.92e-121 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01916 - - gmx:100810825 1239.94