Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01884 ATGGGTGTGTCGCAAAAATGGTTCAGAATTCTTCGCGGAAGATTCATCAGATCATCCAACAAAGACATCATTCTCCCACGCACAAGTATTTGCACTAACGAATGCGAAGAAGCCATACTCAGGAATGAAGACTTCAGTTTCCCTACACAAACACCAACACCTGTTTCTGCAATCACCAAGGAAGATGTTGCGGCCATTAAGATCCAAGCTTTTTTCAGGGGACATCTAGCAAGAAGAGCATATAAAGCATTAAAAGGGCTAGTGAAGGTGCAAGCTTTGGTTCGTGGGGTGTGGGTGAGGAAACAATCACGTATAGCAATGCAGTGTATGCACGCACTTGTACGATTACAAGTCAGGGTTCGTTCAAGGCAGCTACTCGGTAGCTTTGATAAGAAATCAACCATCAACTGA 411 0.4404 MGVSQKWFRILRGRFIRSSNKDIILPRTSICTNECEEAILRNEDFSFPTQTPTPVSAITKEDVAAIKIQAFFRGHLARRAYKALKGLVKVQALVRGVWVRKQSRIAMQCMHALVRLQVRVRSRQLLGSFDKKSTIN 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01884 136 PANTHER IQ-DOMAIN 5-RELATED 55 125 - -
Vian1g01884 136 SMART iq_5 60 82 IPR000048 GO:0005515
Vian1g01884 136 ProSiteProfiles IQ motif profile. 85 112 IPR000048 GO:0005515
Vian1g01884 136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 105 IPR027417 -
Vian1g01884 136 Pfam IQ calmodulin-binding motif 88 102 IPR000048 GO:0005515
Vian1g01884 136 Pfam IQ calmodulin-binding motif 64 82 IPR000048 GO:0005515
Vian1g01884 136 Gene3D - 59 111 - -
Vian1g01884 136 ProSiteProfiles IQ motif profile. 61 89 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01884 Vian-Chr1 22322813 22323353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01884 1 127 IQD Protein Family AT3G51380 48.819 5.73e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01884 - - vun:114179724 237.269