Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01862 ATGATGATGAACCTTTCCACCCTTAAATCTCTTAATGTACGTCTTTTTGTTGTGATGTTTTACATGTTTGATGTAACAGCCAAATCACAAACAAATTACAGCAAGTTTGCAATTCCTGCTGTCATAGCTTTTGGTGATTCAATCTTGGATACTGGGAACAACGATTATATTGAAACCATAATGAAAGCAGATTTCAGACCATATGGGAGGGATTTCTTCGGAGGAAAACCCACAGGAAGGTTTAGCAATGGCAGGATCCCTTCAGACTTTTTAGCTGAAAAGTTTGGAATAAAGGACACTCTGCCACCCTATCTTGATCCAACTCTGGAGATTGAAGACCTCTTAACTGGGGTATCTTTTGCCTCTGCTGGCTCTGGATATGATCCTCTAACACCAGAACTAGCAGCAGTGTTATCAGTAGAGGATCAACTGAATATGTTCAAAGATTACATAGGAAAACTGAAGGCCGATGCAGGGAAAGAAAGGACAGCTTTCATTCTAGCAGAAAGCGTATTTTTTATCAGTATGGGAAGCAATGACGTTTCAGTAACATATTTCATGTCACCATATCGGAGAAATGAGTATAATGTTGAAGACTACACAAGATGTGTGCCACTGCAAAGAACATTAGGGGGAGGTGGAGAAAGGAATTGCGTAGAATCATTAAACCAAGCAGCCATGGTCTTCAACTCCAAGCTTTCTTCTTCAATAGAGGCTCTCAACAAAAGTCTTCCAAAAGCTAGGCTTGTTTACCTTGACAACTATAGTGAACTCAATGAAATTATCCAACACTACAACAAATTTGGAAGCAAATTGGCACATGAATTGATTGACTCTTATGGAACAGGATTTGAAGTGGGGGATACTGCATGCTGTGGCGTTGGAAATATTGAAGCAGGCATTTTGTGTAATTCTTTCTCCTTAAAAGTATGTGAAAATGCTACAAAATATGTATTCTGGGACAGTATTCACCCCACAGAGCGAACTTACAGTATGCTTGTCACAAGTACCATAGCAAAGAATGTTCACAAGTTTGTTTGA 1041 0.3929 MMMNLSTLKSLNVRLFVVMFYMFDVTAKSQTNYSKFAIPAVIAFGDSILDTGNNDYIETIMKADFRPYGRDFFGGKPTGRFSNGRIPSDFLAEKFGIKDTLPPYLDPTLEIEDLLTGVSFASAGSGYDPLTPELAAVLSVEDQLNMFKDYIGKLKADAGKERTAFILAESVFFISMGSNDVSVTYFMSPYRRNEYNVEDYTRCVPLQRTLGGGGERNCVESLNQAAMVFNSKLSSSIEALNKSLPKARLVYLDNYSELNEIIQHYNKFGSKLAHELIDSYGTGFEVGDTACCGVGNIEAGILCNSFSLKVCENATKYVFWDSIHPTERTYSMLVTSTIAKNVHKFV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01862 346 PANTHER GDSL ESTERASE/LIPASE EXL3 21 201 - -
Vian1g01862 346 CDD SGNH_plant_lipase_like 39 334 IPR035669 -
Vian1g01862 346 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 41 52 IPR008265 GO:0006629|GO:0016298
Vian1g01862 346 Gene3D SGNH hydrolase 27 202 IPR036514 -
Vian1g01862 346 Gene3D SGNH hydrolase 203 342 IPR036514 -
Vian1g01862 346 Pfam GDSL-like Lipase/Acylhydrolase 196 332 IPR001087 GO:0016788
Vian1g01862 346 Pfam GDSL-like Lipase/Acylhydrolase 41 192 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01862 Vian-Chr1 22081322 22083218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01862 37 333 Pollen Coat Proteome AT1G75910 35.455 1.29e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01862 - - gmx:100797172 461.455