Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01861 ATGAGTCTTCTCTGTGGAAAGCTTCTTTCTCAATGGCTTATAGTCATTCTCATGTTTCAATATGTTTCTGCACTGATCCTACCCAACAATGAAACTGTGCCAGCAGTCATTGTCTTTGGGGACTCCATAGTAGATACCGGAAACAACAACTATATCTCCACTCTTGTCAAATGCAATTTCCCACCATATGCTGCAAAATTTGGAGTCAAGAAGTTCTTACCTCCTTATCTCGATCCAACTTTGCAGCTTCAAGATCTCCTCACTGGTGTAAGCTTTGCCTCAGATCAATTAATCATGTTCAAGGAGTATATAGACAAGATTAAAGCTGCAGTTGGAGGAAACAGAACCACACAAATAGTGTCTAAGAGCATATACATAGTGTGCATAGGAAGTGATGACATTGCCAATACTTACACTCAATCACCATTTAGGCGTGCTGAGTATGATATTCCTTCATACACTGATCTAATGGCCTCTGAAGCTTCAAAGTTCTTTGAGACACTTTATGGAATGGGAGCTAGAAGGATCGGAGTGTTTGGTATACCAGCTATAGGGTGTGTGCCTTCACAAAGAACAATGGCTGGAGGCTTAGATAGAGCATGTGTAGAATCTTCTAATGAAGCGGCAATGCTCTTCAATTCGAAGCTTTCTTCTCAAATGGATGCACTTGGAAAGAAGTTACCAGACGCTAGACTTGTTTACCTTGATTCTTACAATGGATTGCTAAAAATGATTAGAGATCCTGCTAAATATGGTTTCCAAGTGACAGAGAAAGGATGCTGCGGCACAGGGAATATAGAAGTGAGCATTTTGTGCAACCGCTACATCGTAAACACATGCTCTAACTCTTCTGACTACATATTTTGGGACAGCTATCATCCAACAGAGCAGGCTTACTATGTTCTTAGTACTATAACACTTGATGAAAAAGTTAAGCAGTTCTTTTAA 948 0.4008 MSLLCGKLLSQWLIVILMFQYVSALILPNNETVPAVIVFGDSIVDTGNNNYISTLVKCNFPPYAAKFGVKKFLPPYLDPTLQLQDLLTGVSFASDQLIMFKEYIDKIKAAVGGNRTTQIVSKSIYIVCIGSDDIANTYTQSPFRRAEYDIPSYTDLMASEASKFFETLYGMGARRIGVFGIPAIGCVPSQRTMAGGLDRACVESSNEAAMLFNSKLSSQMDALGKKLPDARLVYLDSYNGLLKMIRDPAKYGFQVTEKGCCGTGNIEVSILCNRYIVNTCSNSSDYIFWDSYHPTEQAYYVLSTITLDEKVKQFF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01861 315 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Vian1g01861 315 Pfam GDSL-like Lipase/Acylhydrolase 36 301 IPR001087 GO:0016788
Vian1g01861 315 CDD SGNH_plant_lipase_like 34 303 IPR035669 -
Vian1g01861 315 SUPERFAMILY SGNH hydrolase 36 304 - -
Vian1g01861 315 Gene3D SGNH hydrolase 25 310 IPR036514 -
Vian1g01861 315 PANTHER GDSL ESTERASE/LIPASE EXL3 19 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01861 Vian-Chr1 22075783 22077423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01861 30 303 Pollen Coat Proteome AT1G75910 33.229 1.02e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01861 - - vun:114175459 553.518