Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01852 ATGGGTTCTATTGGAATCAAAAGCTCGGGATCCGAGGTTGTCACCATTGATGTTCATGCAGCCAAGGGTTTGATCCAGACCGGTCATGTTTATCTCGATGTCAGGACGGTGGAAGAGTTTCAGAAAGGTCATGTGGATGCTGAGAAGATAATTAACATTCCGTACATGTTTAATACACCAGAAGAAGGTAGGGTGAAGAATCCGGAGTTTCTGAAGGAGGTTTTATCAGCGTGCAAGAAAGAAGATCGCATCATCGTGGGTTGTCAAAGTGGAGTGAGATCTGTGTATGCAACTAGTGATCTTCTGACGGAGGGTTTTAAAGATGTGAGGAACATGGGAGGAGGATATCTTGACTGGGTTAAAAATCAATTTCCACTGAAAATACCTTTGAATTTGGTTAAAGATGAAGTTCCACTGAAAGCTCCTCTGGATTTGGTTATAGGTGAAGTTACAGTGAAAGAACCTTTGGACTTGCTTAACAACGAATTACCATAA 495 0.4182 MGSIGIKSSGSEVVTIDVHAAKGLIQTGHVYLDVRTVEEFQKGHVDAEKIINIPYMFNTPEEGRVKNPEFLKEVLSACKKEDRIIVGCQSGVRSVYATSDLLTEGFKDVRNMGGGYLDWVKNQFPLKIPLNLVKDEVPLKAPLDLVIGEVTVKEPLDLLNNELP 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01852 164 CDD RHOD 20 120 - -
Vian1g01852 164 PANTHER THIOSULFATE SULFURTRANSFERASE 18 7 128 IPR044684 GO:0003824
Vian1g01852 164 ProSiteProfiles Rhodanese domain profile. 25 128 IPR001763 -
Vian1g01852 164 Gene3D - 6 127 IPR036873 -
Vian1g01852 164 Pfam Rhodanese-like domain 22 121 IPR001763 -
Vian1g01852 164 SMART rhod_4 16 125 IPR001763 -
Vian1g01852 164 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 126 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01852 Vian-Chr1 21990569 21992158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01852 3 126 Sulfurtransferasese or Rhodanese AT5G66170 57.258 1.05e-49 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01852 - K15692 pvu:PHAVU_003G264200g 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01852 1 21990569 21992158 Vian1g01852 1 21990569 21992158 ECH
Vian10g00834 10 8330378 8332430 Vian1g01852 1 21990569 21992158 PCT