Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01808 ATGGAAGAGATAGTAGGAGAGTTGAGGGAATACTTCAAGACTGAAAAAACCAGAAGTGTAACATGGAGGAAAAACCAGCTCACAGGTATCTTAGACCTTATTCATGAAAACGAAGATGCTATATTCAAAGCCCTTCATCTAGATCTTGGAAAGCACCCTGTTGAGGCTTACCGTGATGAGGTTGGAGGAGTAGAAAAATCAGTCAACAAATCTTTGAGCTGTCTTGAGAAATGGATGGCTCCTAAAAAGAGTGATATTCCTTTGCTCTTCTTTCCAGCTAAAGGAGAAGTATTTTCAGAACCCTTAGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCAATCATGCTGTCATTGGATCCATTAATTGGGGCAATATCTGCTGGAAATGTTGTACTGATAAAACCTTCAGAGCAAGCTCCAGCTTGCTCTTCTTTCCTTGCCAATACCATTCCTCGGTATTTGGACTCTAATGCCATCAAGGTGATTGAGGGTGGATCAAATGTTTGTGAACAACTACTGCAGCAAAAATGGGACAAAATCTTCTTCACTGGAAGTCCAAGTGTTGGAAGCATGGTCATGTCTGCTGCTGCAAAGAATTTAACACCTGTTACTCTAGAGTTGGGTGGAAAATGCCCTGCCATACTTGATTCCCTTCCCAATCCTTCAGAATTTAAGTTGGCAGTCAAAAGAATTATAGGAGGAAAGTGGGGACCTTGCAGTGGACAAGCTTGCATAGGAATAGACTATTTGCTTGTTGAGGATCATTTATCATATTCTCTGATAGAGCTATTAAAGAAGATAATCAAAAGATTTTATGGTGAAAACCCGGTGGAGTCAAAAGTAATTTCCAGAATAGTAAACAAGCATCACTTTCAGAGAATACGCAATCTTCTCAAAGAACCTCTTGTTGCTGCCTCCATCGTTCACGGTGGTTTTATCGATGAAGAAAACCTGTTCATCGAGCCTACAATCTTGCTAGACCCTCCACTAGATTCTCAGATAATGACAGAAGAAATATTTGGTCCATTGCTTCCTATAATCACACTGAATAAAATTCAAGAAAGCATTGAATTTATCAATGCAAAACCGAAACCTCTTGCCATTTATGCTTTCACCAAAGATGAAACTTTCAAGAGAAAAATTATATCAGAAACATCCTCAGGAAGTGTCATATTTAATGACACCTTGGTTCAATTTTTATGTGATACGCTACCATTTGGAGGTGTTGGACAGAGTGGTTTTGGAAGGTACCATGGGAAGTACTCCTTTGACAGTTTCAGCCATGAAAAGGCAGTAATGCATAGAAACCTGTTCCTTGAAATCGAGCCAAGGTACCCTCCTTGGAGTCAGTTCAAGCTAGAGTTTCTCAAACTCGCCTACAGGCTCAACTACTTTGGACTATTACTGCACATGTTAGCCTTCAAACTCGGCTTCAAAAAATACAACTAG 1452 0.3994 MEEIVGELREYFKTEKTRSVTWRKNQLTGILDLIHENEDAIFKALHLDLGKHPVEAYRDEVGGVEKSVNKSLSCLEKWMAPKKSDIPLLFFPAKGEVFSEPLGVVLIFSSWNFPIMLSLDPLIGAISAGNVVLIKPSEQAPACSSFLANTIPRYLDSNAIKVIEGGSNVCEQLLQQKWDKIFFTGSPSVGSMVMSAAAKNLTPVTLELGGKCPAILDSLPNPSEFKLAVKRIIGGKWGPCSGQACIGIDYLLVEDHLSYSLIELLKKIIKRFYGENPVESKVISRIVNKHHFQRIRNLLKEPLVAASIVHGGFIDEENLFIEPTILLDPPLDSQIMTEEIFGPLLPIITLNKIQESIEFINAKPKPLAIYAFTKDETFKRKIISETSSGSVIFNDTLVQFLCDTLPFGGVGQSGFGRYHGKYSFDSFSHEKAVMHRNLFLEIEPRYPPWSQFKLEFLKLAYRLNYFGLLLHMLAFKLGFKKYN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01808 483 SUPERFAMILY ALDH-like 2 448 IPR016161 GO:0016491
Vian1g01808 483 PIRSF ALDH 1 474 IPR012394 GO:0006081
Vian1g01808 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 210 413 IPR016163 GO:0016620
Vian1g01808 483 PANTHER ALDEHYDE DEHYDROGENASE 1 475 IPR012394 GO:0006081
Vian1g01808 483 FunFam Aldehyde dehydrogenase 210 413 - -
Vian1g01808 483 Pfam Aldehyde dehydrogenase family 4 433 IPR015590 GO:0016491
Vian1g01808 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 9 431 IPR016162 GO:0016491
Vian1g01808 483 FunFam Aldehyde dehydrogenase 9 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01808 Vian-Chr1 21408165 21411393 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01808 1 476 Aldehyde Dehydrogenase Gene Family AT4G36250 62.185 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01808 K00128 - gmx:100809812 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01808 1 21408165 21411393 Vian1g01808 1 21408165 21411393 ECH