Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01807 ATGGAATGGATTATTGGACTGTGGACTCTGATGGGTATCATCCTTACATGGTGGTGCTACTGGTTTCTGTGTGTCAAAAAGGAAAACGGTGACAGGGTGAAACAGAAGAAGAAGAAGAAGAAGAAGGGGAAAGTTCCAAGAGGTAACAAAGGTTGGCCTTTACTCGGAGAAACCCTTGAGTTCATTGCTTGTGGCTACACCTCCAACCCTGTCAGCTTCATGGAAAAACGCAAGTCTCTGTATGGTAGTGTATTTAAGACAAGCATTTTGGGAACTGGTGTGATTGTGTCCACAGACCCAGAAGTGAACAAGGTGATTCTGCAGAACCAGGGGAACATATTCGTCCCTGCTTATCCAAAATCTGTGAGAGAACTAATGGGAGACTACTCCATCCTCCAAATGAACGGGAACATGCATAGGAAAATTCATTCACTCCTTGGAGGCTTCCTACGATCCCCTCAATTCAAAGCTCGAATCACTACAGATATTCAACACTCTGTTAAACAATGCTTTGCAACTTGGACCCACCAACCAATTTACGTTCAAGATCAAGTCAAAAAGATCACATTCACTATTCTGGTTAAAGTTCTGCTTAGCATTGGTCCCGGTGAAGATTTAGACTTCTTGAAGAGAGAATTTGAAGAGTTCATAAAAGGGTTGATTTGCTTACCCCTCAAGTTTCCTGGAACAAGACTACATAAATCCTTGAAGGCTAAGGAAAGAATGATGAAAATAGTGAAGAGGGTAATAGAGGAAAGGAACAATAATATGCATAAGAAGAAGAATTCAGAAGAGAAAGGAGGTGCAGCAAATGATGTGGTGGATGTGCTCTTAAGGGATATTGGTGATAGCAACACTATCTCTAACATGTTGGAAAATATCTGTGAGAACATAATTGAGATGATGATCCCTGGGGAGGAGACTCTTCCCACGGCTATGACCATGGCTGTCAAATTTCTCAGTGACTCTCCCCTTGCCCTATCCAAATTACTGGAAGAGAACATGGAATTGAAGAGGCGGAAGAATAGTGCAGAGGATTACGTATGGAGTGACTACCTTCAACTGCCATTCACACAAAATGTTATCAGCGAAACTCTGAGAATGGCAAATATTGTGAATGCGATTTGGAGAAAAGCAGTGAAAGACGTTGAAATCAAAGGGTATTTGATTCCTAAGGATTGGTGTGTTGTGGCATCTCTTACTTCTGTGCATATGGATGAGATGAATTACGAAAACCCTTTTAAGTTTGATCCTTGGAGATGGGAGAAAAGCGGAGGAGGAGCTAATAACAATTGGTTTACACCATTTGGTGGTGGACAGAGACTGTGTCCTGGAATAGAACTCTCAAGGCTAGAGCTATCTATCTTCCTTCACCATCTTGTTACCACTTACAGATGGGTGGCGGAGAAGGATGAAATAATCTACTTTCCAACAGTGAAGATGAAGAGGAAGCTCCCAATTAGTGTAACAAGCATTAATTAA 1482 0.417 MEWIIGLWTLMGIILTWWCYWFLCVKKENGDRVKQKKKKKKKGKVPRGNKGWPLLGETLEFIACGYTSNPVSFMEKRKSLYGSVFKTSILGTGVIVSTDPEVNKVILQNQGNIFVPAYPKSVRELMGDYSILQMNGNMHRKIHSLLGGFLRSPQFKARITTDIQHSVKQCFATWTHQPIYVQDQVKKITFTILVKVLLSIGPGEDLDFLKREFEEFIKGLICLPLKFPGTRLHKSLKAKERMMKIVKRVIEERNNNMHKKKNSEEKGGAANDVVDVLLRDIGDSNTISNMLENICENIIEMMIPGEETLPTAMTMAVKFLSDSPLALSKLLEENMELKRRKNSAEDYVWSDYLQLPFTQNVISETLRMANIVNAIWRKAVKDVEIKGYLIPKDWCVVASLTSVHMDEMNYENPFKFDPWRWEKSGGGANNNWFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAEKDEIIYFPTVKMKRKLPISVTSIN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01807 493 CDD CYP90-like 77 490 - -
Vian1g01807 493 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01807 493 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01807 493 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01807 493 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01807 493 Gene3D Cytochrome P450 33 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01807 493 Pfam Cytochrome P450 46 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01807 493 SUPERFAMILY Cytochrome P450 41 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01807 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Vian1g01807 493 PANTHER CYTOCHROME P450 26 42 467 - -
Vian1g01807 493 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 35 492 - -
Vian1g01807 493 Coils Coil 327 347 - -
Vian1g01807 493 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01807 493 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01807 493 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01807 493 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01807 493 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01807 493 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01807 Vian-Chr1 21397020 21402904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01807 44 465 Cytochrome P450 AT3G13730 54.009 3.72e-167 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01807 K12637 - gmx:100812489 851.277